Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq55 109 5e-19 >seq55 Length=1684425 Score = 109 bits (120), Expect = 5e-19 Identities = 156/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| |||||||| || ||||||| | || || ||||| || Sbjct 937918 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTAGAGGTTGAGTCTTCC 937859 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||||||||| || || ||| | || | ||| ||||| || || || || ||||| Sbjct 937858 GACACTATCGA--CAATGTCAAGTCCAAGATTCA-GGACAAGGAGGGCATCCCTCCTGAT 937802 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | ||||| || ||||| || | ||||||| ||||| | |||||| Sbjct 937801 CAGCAGCGATTGATTTTCGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCTGATTAC 937742 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| || || || || || ||| | || || Sbjct 937741 AACATTCAGAAGGAGTCTACCCTCCATCTCGTCCT 937707 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| || ||||| || |||| || |||| || ||||| ||| Sbjct 937408 ATGCAAATCTTCGTCAAGACCTTAACCGGCAAGACCATAACCCTCGAGGTTGAGTCATCT 937349 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| || || || || ||||| ||||||||| Sbjct 937348 GACACCATCGACAATGTGAAGAGTAAGATCCAGGATAAGGAGGGTATTCCTCCTGACCAA 937289 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || |||||||| ||| | || || | || || | || ||||| Sbjct 937288 CAGCGACTTATCTTCGCCGGCAAGCAACTGGAGGACGGACGTACCCTTTCTGACTACAAC 937229 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || || || || || || || || Sbjct 937228 ATTCAGAAGGAGTCAACTCTGCACTTGGTTCT 937197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327667285345