Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq61 170 2e-37 >seq61 Length=1579179 Score = 170 bits (188), Expect = 2e-37 Identities = 376/559 (67%), Gaps = 5/559 (1%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || |||||||| || | ||| || || || || || | ||| ||| ||| || | Sbjct 1456578 GCAGGCGAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAG 1456637 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | || || || ||||||||||| || || || ||||| |||| || || Sbjct 1456638 ACCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAA 1456697 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 ||||| || || || || || || || | ||| | |||||| | | | || | || Sbjct 1456698 GATACCCTCGACAGCAGCGAAGGCAACCAGACGCTGGGCAAAGGTAGAGTCCTTG-TCCT 1456756 Query 93271 G-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329 | |||||| | ||||| || || || || || || || | || || | ||||| Sbjct 1456757 GGATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTATCAACAGCGT 1456816 Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389 | || ||||| ||||| | | | ||| ||||| || || || | ||| ||||| Sbjct 1456817 TGAAGAGGTAGGTTCGCTGGGCGGGCTCTTTGATGTAGGTGTCAATGAGCAGGGAATAGG 1456876 Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 | || || || | |||||||| ||||||||||||||||| |||| ||| || | || Sbjct 1456877 TCTCCGAGTGAATGTTCTCCATCATGATTTGGAATCCGTAGAAGCATCGAGCCTCAGGGA 1456936 Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 |||| || || |||| ||| |||||||| || ||||| || |||||||| || | Sbjct 1456937 TCTGGACCTCGCCGCTGAATCGCTCAACGAGATTCTCGTTGACAATGCCATCGGACGCAG 1456996 Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCA-TCTT--TAAGCTTATCCC 93566 | || || || | || || || || | ||||||| | | | | || | || Sbjct 1456997 CGAAGAAGGCAAGGATGTGAGAGATGAAGAACTGCTCATCAGTGGTCAGACGGTTGTTCC 1457056 Query 93567 AATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTT 93626 | ||| || || || || ||||| | || ||| ||||||| || || || || || | Sbjct 1457057 AGTCGTGGAGGTCCTTGGAGAGATCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCGGCCT 1457116 Query 93627 TTTTGTACATATCCCATAT 93645 | |||||||| | ||| || Sbjct 1457117 TCTTGTACATTTGCCAGAT 1457135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860361472120