Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq11 170 4e-37 seq1 152 9e-32 seq55 147 4e-30 seq61 118 2e-21 >seq11 Length=779747 Score = 170 bits (188), Expect = 4e-37 Identities = 177/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || |||||||| || |||||||| || ||| Sbjct 735667 CCACCACGGAGGCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTC 735608 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || |||| || ||||| || ||| Sbjct 735607 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGA 735548 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| || |||||||| | || || || Sbjct 735547 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 735488 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGC 68466 || | |||||| || || |||||||||||||||||||| |||||||| |||| Sbjct 735487 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATGATGC 735436 >seq1 Length=5443851 Score = 152 bits (168), Expect = 9e-32 Identities = 141/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || |||||||| || | ||||| || | |||||| || ||||| || Sbjct 4488630 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGATC 4488571 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 |||| |||||||| || |||||||| |||||||| || ||||| | |||||| ||| Sbjct 4488570 AGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 4488511 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| | || || || || | ||||||||| || ||||| |||||||||||||| Sbjct 4488510 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 4488452 Score = 132 bits (146), Expect = 9e-26 Identities = 447/684 (65%), Gaps = 53/684 (8%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| | || ||| ||||||| ||||| || |||||| |||||| Sbjct 2624375 CGCCACTGGATGTACTCGGAAGGAGTCTTGTCCAGATGGTTATCGATATGGGCGAAAGCG 2624434 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| | ||| || || || ||||| |||| | | ||| | || || Sbjct 2624435 TGCTGCTTAATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCCTGGGTAGGG 2624494 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 ||| ||||||||||| ||||| || |||| |||||| ||||| ||||| || || Sbjct 2624495 ATAAGCTCACCGGTGAGGACGTTGATCAGAGTAGACTTGCCAGCACCGTTGGGACCGATG 2624554 Query 225161 ACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGG---G 225217 ||| |||| || || || | ||| | | || ||||| ||| || | Sbjct 2624555 ACGGCAATACGAGAGCCCAGAGAGCACTGGAAAGAGATGTCGCTGA---TCTGGGGCTTG 2624611 Query 225218 CCAGTTT---GGTAAGCAAAGGCCACGC------CACGCAGCTTCATGATGGCACGGTCC 225268 ||| |||| |||| || | |||| || |||||| | || Sbjct 2624612 GAAGTACCGGGGTACTGGAAGGACATGTTGGTGGCACGGAG------GATGGCCTTGGCC 2624665 Query 225269 TTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGG------GAACTCCCACTTGG--TCA 225320 |||| | | |||||| ||||| ||||||||||| ||||||| || || ||| Sbjct 2624666 TTGGTCTTGACACCCTCAAGGAAACCGGGCTCGGGGAAGGTGAACTCCATCTCGGACTCA 2624725 Query 225321 CCGCGTCCTTCAGGTCGTAGTAAGA---TGCAGCCTCGGGTCGCTTTGCCACGAAAGCAG 225377 ||| || ||||||||||| |||| |||| || || ||||| |||| Sbjct 2624726 CCG--------AGCTCGTAGTAAGACTTGGCAG--AGGGGTTGC-GGGCGACGAAGGCAG 2624774 Query 225378 ACAGGTTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAG 225436 |||||| || || | ||||||||| || |||||| ||||| || ||| | | Sbjct 2624775 CCAGGTTACCTCTGTAACGCTTGAGCTTGA--ATC-GCTCGTAGTGAACGATGTGCTG-G 2624830 Query 225437 CACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACG-ACACGTTCGTCAG 225495 || || ||| ||||| ||||||||||| || || || ||||| | || | || Sbjct 2624831 CAGACGTTGTCGAGGAAACCAGAGTCGTGAGAGACGATAATGGAAGTGCAAG--CG--GA 2624886 Query 225496 GCCCTTGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTC 225555 | |||||||| | |||||| ||||| | || |||| ||||| ||||| || Sbjct 2624887 GTTCTTGAGGTACTCCTCGAGCCACTTAACGTTCTTCACATCCAAATGGTTGGTAGGCTC 2624946 Query 225556 GTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTT 225615 ||| |||||||| || || | | | || || ||| || |||| ||||||||| || Sbjct 2624947 GTCAAGAAGCAGAATATCGGGAGCCTCGAAGACGGCACGGCACAGAGCCAGCTTCATCTT 2625006 Query 225616 CCAGCCCCCGGACAGGGAGCCGAT 225639 ||| || || || |||| || ||| Sbjct 2625007 CCAACCACCAGAGAGGGCGCTGAT 2625030 >seq55 Length=1684425 Score = 147 bits (162), Expect = 4e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | || || || ||||| || || ||||| ||||| ||| Sbjct 937692 CCACCACGGAGGCGGAGGACGAGATGGAGGGTAGACTCCTTCTGAATGTTGTAATCAGAG 937751 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| || ||||| || | || || || || || || Sbjct 937752 AGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCGAAAATCAATCGCTGCTGATCAGGAGGG 937811 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| | |||||| ||||| ||||| | || || || Sbjct 937812 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACC 937871 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || | ||||||||| || || || | |||||||||||| || ||||| ||| Sbjct 937872 TCTAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATGATG 937922 Score = 140 bits (154), Expect = 6e-28 Identities = 161/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | || | || || |||||||| || |||||||| || |||| | Sbjct 937410 CCACCACGAAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 937469 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || | | || ||||| || ||| Sbjct 937470 AGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGGTCAGGAGGA 937529 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | ||||||| |||||||| || | || || || Sbjct 937530 ATTCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGGAGGACTCAACC 937589 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | |||||||| || || |||||||||||||||| Sbjct 937590 TCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 937626 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | ||| || || ||||| || |||||||| || ||| Sbjct 936954 CCGCCACGAAGTCGGAGAACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTC 937013 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || || || | |||||| || ||||| || || | || ||||| || ||| Sbjct 937014 AAAGTGCGACCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGA 937073 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||| ||| ||| || || ||||| |||||| || Sbjct 937074 ATACCCTCCTTGTCTTGAATCTTGCTCTTCACGTTATCAATAGTGTCACTTGATTCGACC 937133 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || ||||| ||||| |||||||| || |||||||| Sbjct 937134 TCGAGGGTGATAGTCTTTCCAGTGAGAGTCTTGACAAAAATCTGCAT 937180 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || || ||||| || || ||||| || || || Sbjct 937182 CCACCACGCAGACGAAGAACCAAGTGCAGAGTTGACTCCTTCTGAATGTTGTAGTCAGAA 937241 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||| |||||||| || |||| |||||||| || ||| Sbjct 937242 AGGGTACGTCCGTCCTCCAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGGTCAGGAGGA 937301 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || || ||||| ||| || ||||||||||| | ||| || || Sbjct 937302 ATACCCTCCTTATCCTGGATCTTACTCTTCACATTGTCGATGGTGTCAGATGACTCAACC 937361 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| ||||| || || || | |||||||||||| || ||||| Sbjct 937362 TCGAGGGTTATGGTCTTGCCGGTTAAGGTCTTGACGAAGATTTGCAT 937408 >seq61 Length=1579179 Score = 118 bits (130), Expect = 2e-21 Identities = 560/869 (64%), Gaps = 37/869 (4%) Strand=Plus/Plus Query 9938 GACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAG 9997 ||| || ||||||||||| || | || || |||||||||||||| |||||| | || Sbjct 1456278 GACACCAGCCTTCTGGTAGTCAGCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAG 1456337 Query 9998 GGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAG 10057 || ||| |||||||||||| |||||||| ||| | ||| || ||||| Sbjct 1456338 AGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAG 1456397 Query 10058 TGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCAT 10117 ||| || | |||||||| || ||||| |||||||| |||| || | |||||||| Sbjct 1456398 TGCGACGAGCAGACGGTCAGCGACAAACTCAATGTACTGCTTCATGAGATTGGAGTTCAT 1456457 Query 10118 GCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTC 10177 ||||| || | ||||||| ||| || | ||| |||| || ||| ||| || || Sbjct 1456458 GCCAAGCAGGGCACAGGGGAGGGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATC 1456517 Query 10178 CTCGACGATGCTCTTTACCA----CGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACA 10233 | |||| || | || | | | || || || ||| | || | | Sbjct 1456518 ACAAATGATGTCCTGGATCATCTGCTTGCTAGCACGGC----CCTTGAGGTGGGAGTGAA 1456573 Query 10234 GGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAAC 10293 | || | || | ||| || ||||| || || ||||| ||||||||| || Sbjct 1456574 GAAGGCAGGCGAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGG 1456633 Query 10294 CCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGA 10353 ||||||||||||||| || || || |||||||| |||| | || | || || Sbjct 1456634 TCAGACCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGA 1456693 Query 10354 ACAGAAGACCCTCCAC-GCACACCCAGGCGACGAGGCGCTCTGCGAAGGAGCGGTCGCGC 10412 | | | |||||| || ||| | |||| || || |||| || |||| ||| | Sbjct 1456694 AGAAGATACCCTCGACAGCA-GCGAAGGCAACCAGACGCTGGGCAAAGGTAGAGTC-CTT 1456751 Query 10413 GAAAAGTAT--TTCGA--GGCCCACGCTGCCTTCTTTCCCACGGCAGGG-ATCGTCTCGA 10467 | | || |||| |||||| | |||||||||| | |||||| || || || | Sbjct 1456752 GTCCTGGATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGA-TGCAGGGAATGGTATCAA 1456810 Query 10468 TAGCCTCGAAGAGCTTGTTACGCT---CGGTCTCGTCCTCAATAAGAGCATCAAGGAGCA 10524 ||| | |||||| | | | |||| ||| ||| | | | || | |||| ||||| Sbjct 1456811 CAGCGTTGAAGAGGTAGGTTCGCTGGGCGGGCTCTT--TGATGTAG-GTGTCAATGAGCA 1456867 Query 10525 GGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAA-CATACGT 10583 |||| || ||| ||| | | |||| | ||| | ||||||| ||| || Sbjct 1456868 GGGAATAGGTCTCCGAGTGAATGTTCTCCATCATGATTTGGAATCCGTAGAAGCAT-CGA 1456926 Query 10584 GCC-GAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTC-AGGTTCTCCATCACCATGC 10641 ||| |||| || | ||| | | | || | | | | | || ||||| | || |||| Sbjct 1456927 GCCTCAGGGATCTG-GACCT-CGCCGCTGAATCGCTCAACGAGATTCTCGTTGACAATGC 1456984 Query 10642 CATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCA 10701 ||||| | || |||||| | |||||||| ||||||| |||||||| | ||| Sbjct 1456985 CATCGGACGCAGCGAAGAAGGCAAGGATGTGAGAGATGAAGAACTGCTCATCAGTGGTCA 1457044 Query 10702 ----GTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAG 10757 ||| || |||||| | |||| | ||| | | |||||| | |||||| Sbjct 1457045 GACGGTTGTT----CCAGTCGTGGAGGTCCTTGGAGAGATCAATCTCCTCGGCAGTCCAG 1457100 Query 10758 AAAGTGGCAACGGCCTTCTTGTACATCTG 10786 || | || |||||||||||||||| || Sbjct 1457101 AAGGAAGCCTCGGCCTTCTTGTACATTTG 1457129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621674222360