Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq61 107 4e-18 seq1 93.3 9e-14 >seq61 Length=1579179 Score = 107 bits (118), Expect = 4e-18 Identities = 127/172 (74%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 243566 TTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCA 243625 ||||||||||||| | |||||| |||||||| || || || || ||||| | || Sbjct 1456462 TTGGCATGAACTCCAATCTCATGAAGCAGTACATTGAGTTTGTCGCTGACCGTCTGCTCG 1456403 Query 243626 TCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCA 243685 |||| || || | ||||| || ||||| ||| |||||||| | ||| |||||| || Sbjct 1456402 TCGCACTCGGCAACGAGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACA 1456343 Query 243686 TTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 | || ||| || || || ||||||||||| ||||||||| ||| || || Sbjct 1456342 TCTCTCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGCTGACTACCA 1456291 >seq1 Length=5443851 Score = 93.3 bits (102), Expect = 9e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 334136 GTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAG 334195 |||||| ||||| || ||| | |||| || | | ||| |||||| || |||| Sbjct 2625166 GTCGAGGTCGTGCTCGACGAAGACAGTCTTGACCTCGTCCTGCTTGGGGAAACCCTCAAC 2625225 Query 334196 CTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAG 334255 ||| |||| || |||||||| ||||| || || || | ||||| || || || || Sbjct 2625226 CTGCTCGTTGTTGATGGCGCGCATAAGAGTGGACTTTCCGGAACCGTTGGGACCGCAAAG 2625285 Query 334256 ACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACC 334315 |||||| || | |||||||| || || | || | ||| |||||||| || |||| Sbjct 2625286 ACCGTAACGCTGACCACGCTTGAGGCGGAGATGGGTCTGGTTGAGAAGAATCTTGGCACC 2625345 Query 334316 ATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 || || ||||| || ||| | || ||||||||||| Sbjct 2625346 GTAGGCAAGAGAGAAGGTACAGTTGCAAAGATCCTCACC 2625384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879109769050