Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq44 190 2e-43 >seq44 Length=2799272 Score = 190 bits (210), Expect = 2e-43 Identities = 668/1032 (65%), Gaps = 26/1032 (3%) Strand=Plus/Plus Query 113903 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 113962 |||||||| |||||||| || ||| || | | | || || |||| ||||| ||| Sbjct 2094581 TTGACAACCTGGAACTCACCAGCAAGGACTCGGCGCTGGTAAATGTTGGAGGTGTAAGGC 2094640 Query 113963 TCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATG 114022 || |||||||| |||||||||| || || | || ||| || ||||| || || | | Sbjct 2094641 TCGAAGCACTCGTTGTTACCCAGAATCTGCGAAGTACTGGCAGTAGGCATAGGGGCGAGG 2094700 Query 114023 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTC-CTTGAGGGCG-TCCCAGTCGT 114080 || || |||||||||| ||| | | ||| | | | || || | | |||||||| Sbjct 2094701 AGCAGACTGTTACGGATACCGTGAGTCTTAA--CATCCTCTCGAAGACTCTCCCAGTCCC 2094758 Query 114081 AGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCG 114140 | | | || | | |||||| || |||||||| ||||| | ||||| || | Sbjct 2094759 AAAGGTCGGAAGGCTTGACGTTCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAG 2094818 Query 114141 ATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGA 114197 | |||| || || ||| || ||||| ||| ||||| | ||||| || || Sbjct 2094819 AACCCTTGAAGGTAGAGTAGGGACCCTCCTCCTTGGCCAACTGCACGGAG---GCAGTGA 2094875 Query 114198 GGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAAT 114257 |||| ||||| || || |||||||| || | || | | | |||||| || | Sbjct 2094876 GGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCTCTAGCCTCGGGAGACT 2094935 Query 114258 CAAACGCGAGTCGGCACAA-AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATT 114316 |||| | | || || | || || |||| || ||||| |||||||| || || || Sbjct 2094936 CAAAGGGCATGCG-CAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAAGACCGATA 2094994 Query 114317 GGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATA 114376 || || || | ||| || || ||||| | || || || ||| |||||| Sbjct 2094995 GGTCGGTGACGCATGTTGCTGTTGCGAGCCTCTTGTACAGGGTAGTGATTGACATCGATG 2095054 Query 114377 ACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA 114436 | | | || | || | |||||||| ||| | ||| ||||| | | | ||| | Sbjct 2095055 ATCTTGTTCAAGTTGCGGACGACAACCTGACTGACCTGATGCAGCTTCTTGAAGTCATA- 2095113 Query 114437 CTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 114493 || || ||| || | ||| | ||| ||||| | || || || || || ||| Sbjct 2095114 --GCAAGCCTCATCGTAGTTGATGAAAGCAGGCAGGGCAAGGGAGGCAAGGTTGCAAACA 2095171 Query 114494 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATG 114553 | | |||||| || |||||| || || || || |||| ||| || || ||| Sbjct 2095172 GCGACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCACAGATTAGAGCTTCGGATG 2095231 Query 114554 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGC 114613 || || | |||||| || || ||| |||||| |||||||||||||||||| | || Sbjct 2095232 GTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTACAGGCATCCTTGTAAAGCATGAAGGGG 2095291 Query 114614 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGT 114672 | || ||||| || |||| || || || || | ||| | | || | | || | | Sbjct 2095292 TTTCCGGTCTCGGTCTGGGCCTCAAGGATGGCATACCAAAGCTTCTGAGCCTTG----AT 2095347 Query 114673 GGCGTTGGCTCGC---CCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACC 114729 || ||| | | || ||| ||||||||| ||||||||| |||||||||||||| Sbjct 2095348 GGACTTGCGACCCTTACCTTCCCTCTCGTACTTCTCGTAGAGGGCCTCAAACTCTTCACC 2095407 Query 114730 CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTC 114789 | || | || || || || | ||||| | || | ||| | || || Sbjct 2095408 GTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGGCACATAAGGGTCCACTCTCCGTTCTT 2095467 Query 114790 CTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCG 114849 |||||||||||||||||| || || ||||||||||| || ||| || || || ||| Sbjct 2095468 CTCAACACGCTTCATGAAAAGATCAGGGATCCAGAGGGCCAGGAACAGGTCGCGGGCGCG 2095527 Query 114850 AGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCA 114909 | || || | || || || || | || | || || | || ||| |||||||| Sbjct 2095528 GACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACATCAGCGTGCCA 2095587 Query 114910 CGGTTCCAGGTA 114921 || || ||||| Sbjct 2095588 AGGCTCTAGGTA 2095599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353129584040