Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq44 241 1e-58 >seq44 Length=2799272 Score = 241 bits (266), Expect = 1e-58 Identities = 1061/1664 (64%), Gaps = 28/1664 (2%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| || ||||| || |||||||||||||| || |||| | Sbjct 2096070 TACCAATACTTTGGCTTCAAGACATTGGAGCGATCATACCTCCTCAAGATTGACGGCAAG 2096011 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||||| || || || || | ||||| || | || || || || | || Sbjct 2096010 ATTGTCGAGCGTCCTCAGCACATGATCATGCGTGTGTCTATTGGCATCTGGGGTGATGAT 2095951 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897 || | ||| || | | | | ||| |||| | ||| || || Sbjct 2095950 ATTGAGCGTGTCGTGGAGACATATAACCTTATGTCCAGCAAGTTCTTCACCCATGCTTCC 2095891 Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GAC 93956 || ||||| ||||| || || ||||| || ||| | || || || ||| || | ||| Sbjct 2095890 CCCACCCTCTTCAATGCTGGTACCCCTCAACCCCAGCTTTCCTCATGCTTCTTGGTTGAC 2095831 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | |||| ||| ||| ||| || | || | ||||||| |||||| | || || Sbjct 2095830 -ATGAAGGAGGACAGCATTGACGGTATCTATGATACCCTCAAGACCTGTGCCATGATTTC 2095772 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACAT 94076 || || || || || || ||| || |||| | ||||||| || |||||||| Sbjct 2095771 CAAGATGGCTGGTGGTATTGGTCTCAATGCCCACCGAATCCGTGCCACTGGCTCCTACAT 2095712 Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136 |||||||| || || |||||||| | || |||||||| || |||||||||||| | Sbjct 2095711 TGCTGGTACCAACGGTACATCCAACGGTGTTGTTCCTATGCTACGTGTCTTCAACAACAC 2095652 Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196 || |||||||| || ||||||||| | | | ||| |||| || |||| || || Sbjct 2095651 TGCCCGCTACGTTGATCAGGGTGGTAACAAGCGACCTGGTGCTTTTGCCATCTACCTAGA 2095592 Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256 ||| |||||||| || || | ||| | || || |||||||||||||| || || Sbjct 2095591 GCCTTGGCACGCTGATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGA 2095532 Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316 || | ||| | ||||| ||| || |||||| | || || ||||| ||||| || || Sbjct 2095531 GGTCCGCGCCCGCGACCTGTTCCTGGCCCTCTGGATCCCTGATCTTTTCATGAAGCGTGT 2095472 Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC-G 94375 ||||| ||| | |||| ||| | || ||||| || || || || || ||||| | Sbjct 2095471 TGAGAAGAACGGAGAGTGGACCCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACTG 2095412 Query 94376 TT--TGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433 | ||| | | ||||| | | | || | ||||| | | || |||| | Sbjct 2095411 CTACGGTGAAGAG---TTTGAGGCCCTCTACGAGAAGTACGAGAGGGAAGGTAAGGGTCG 2095355 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 ||| || | ||| |||||| ||| || ||| | || | ||| ||||| || Sbjct 2095354 CAAGTCCATCAAGGCTCAGAAGCTTTGGTATGCCATCCTTGAGGCCCAGACCGAGACCGG 2095295 Query 94494 TACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 | |||| ||| | | |||||| |||| ||| |||| ||||||| || |||||| Sbjct 2095294 AAACCCCTTCATGCTTTACAAGGATGCCTGT-AACCGCAAGAGCAACCAGAAGAACCTCG 2095236 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | ||| ||||| ||||||||||| ||||| ||||||| | | || || ||| Sbjct 2095235 GTACCATCCGAAGCTCTAATCTGTGCACTGAGATCATCGAGTACTGTGCCCCTGATGAGG 2095176 Query 94613 TTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGT 94672 | ||||| || ||||| | |||| | |||| | ||||| | | | |||| Sbjct 2095175 TCGCTGTTTGCAACCTTGCCTCCCTTGCCCTGCCTGCTTTCAT-CAA-----CTAC---G 2095125 Query 94673 CTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG--GTCTTGAA 94730 | |||| | || | || |||| | | | | ||| || ||| || Sbjct 2095124 ATGAGGCTTGCTATGACTTCAAGAAGCT--GCATCAGGTCAGTCAGGTTGTCGTCCGCAA 2095067 Query 94731 CCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCT 94790 | |||||| | | ||||| || |||||| || | ||||| ||| ||| | Sbjct 2095066 CTTGAACAAGATCATCGATGTCAATCACTACCCTGTACAAGAGGCTCGCAACAGCAACAT 2095007 Query 94791 GAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCG 94850 | || || || ||||| | || ||||||||| | || || || | | |||| Sbjct 2095006 GCGTCACCGACCTATCGGTCTTGGTGTCCAGGGTCTTGCTGATGCTTTCCTTGCTCTGCG 2094947 Query 94851 TCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTA 94910 |||||| || ||| ||| || | | || | | || || || | ||| || Sbjct 2094946 CATGCCCTTTGAGTCTCCCGAGGCTAGAGAGCTCAACAAGCAGATCTTTGAGACCATCTA 2094887 Query 94911 TTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATC 94970 ||| ||| | | ||||| || ||||||| ||| | || || || | Sbjct 2094886 CCACGCTGCCCTCACTGCCTCCGTGCAGTTGGCCA---AGGAGGAGGGTCCCTACTCTAC 2094830 Query 94971 GTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCC 95030 ||| || || ||| |||| ||| | ||||||||| | ||| || ||||| Sbjct 2094829 CTTCAAGGGTTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAACGTCAAGCC 2094770 Query 95031 CTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAA 95090 || | || | |||||||| ||| || | ||||||| | |||||| | || Sbjct 2094769 TTCCGACCTTTGGGACTGGGAGAGTCTTCGAGAGGATGTTAAGACTCACGGTATCCGTAA 2094710 Query 95091 CGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGA 95150 | ||||| | ||||| ||||| || ||| || ||||||| || || |||||||| Sbjct 2094709 CAGTCTGCTCCTCGCCCCTATGCCTACTGCCAGTACTTCGCAGATTCTGGGTAACAACGA 2094650 Query 95151 GTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCC 95210 || ||||| || | |||||||||| | ||| | | || || || || || || |||| Sbjct 2094649 GTGCTTCGAGCCTTACACCTCCAACATTTACCAGCGCCGAGTCCTTGCTGGTGAGTTCCA 2094590 Query 95211 CGTCATCAACAAGCACCTCCT-ACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGG 95269 || ||||| | || | | | || || | |||| ||||| ||| Sbjct 2094589 GGTTGTCAACCCCTGGTTGCTCAAAGATCTTGTCGAC-ATGGGCTTGTGGTCTGATGCCA 2094531 Query 95270 TCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGG 95329 | ||||||| | | || ||||| || | ||||||||||| | || || | | Sbjct 2094530 TGAAGAACCGTATTATTTCCGATAACGGTTCTATTCAGAACATCCCCAATATCCCTGCCG 2094471 Query 95330 ACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 || ||||||| || |||||||| || |||||||| | |||||| Sbjct 2094470 ACGTCAAGGCTCTTTACAAGACTGTTTGGGAGATTTCTCAGCGC 2094427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722810405480