Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq61 118 1e-21 seq11 118 1e-21 seq55 116 4e-21 seq1 84.2 2e-11 >seq61 Length=1579179 Score = 118 bits (130), Expect = 1e-21 Identities = 470/724 (65%), Gaps = 33/724 (5%) Strand=Plus/Minus Query 52122 GCGTTCTTCGCCGCCGCCGATAGCATCGTGAACATTAACCTCATCGAGTACATGCAGCGG 52181 || |||||||| || ||||| |||| || ||| || ||| | ||| || |||||| Sbjct 1457006 GCCTTCTTCGCTGCGTCCGATGGCATTGTCAACGAGAATCTCGTTGAGCG-ATTCAGCGG 1456948 Query 52182 AACGTTCCGGAACTC-GAGGCGCAATACTTTTATAATTTGCAAGTGCTCATCGAGTGCGT 52240 | ||| || | | ||||| | || ||| || || ||| | | || ||| | | Sbjct 1456947 CGAGGTCCAGATCCCTGAGGCTCGATGCTTCTACGGATTCCAAATCATGATGGAGAACAT 1456888 Query 52241 GCACACGGAGATGTACAATCTGCTCATTGAGCAGCTG-ATAAAAGATGAGCACGAGC-GC 52298 ||| |||||| || ||||||||||| || || || ||||| || || | || Sbjct 1456887 TCACTCGGAGACCTATTCCCTGCTCATTGA-CACCTACATCAAAGA---GCCCGCCCAGC 1456832 Query 52299 GACACG--CTGCTGAATGCGTTCGAGCACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGG 52356 || | || | || || | || | | || ||| | || || |||||| | |||| Sbjct 1456831 GAACCTACCTCTTCAACGCTGTTGATACCATTCCCTGCATCCGAAAGAAGGCTGACTGGG 1456772 Query 52357 CAATGAAGTGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCA 52416 | || |||||| || | | | | || | ||| |||| |||| |||||||| Sbjct 1456771 CCATTCGATGGATCCAGGACAAGGACTCTACCTTTGCCCAGCGTCTGGTTGCCTTCGCTG 1456712 Query 52417 TAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAG 52476 |||||||| | || || || ||||||| ||||||| | | || | | | Sbjct 1456711 CTGTCGAGGGTATCTTCTTCAGTGGTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTG 1456652 Query 52477 GCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACA 52536 || | |||||||| ||||| ||| ||||||| | || || || || || || || |||| Sbjct 1456651 GCCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGTCTTCACA 1456592 Query 52537 CGGACTTTGCGTGCCT------CTACTACAAGACGCGC-GTGACCGAAAAATTGGATTCG 52589 | ||||| || ||||| || | || | | || ||| | || | Sbjct 1456591 CCGACTTCGCCTGCCTTCTTCACTCCCACCTCAAGGGCCGTGCTAGCAA----------G 1456542 Query 52590 GACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCC 52649 | | ||||| | ||| | || || || | || || ||||||| | || | Sbjct 1456541 CAGATGATCCAGGACATCATTTGTGATGCCGTCACCATTGAGCAGGAGTTCCTCACTGAG 1456482 Query 52650 GCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTC-CATGTGCGAGTACATCGAGTT 52708 || || || | ||||| ||||||||| | || || |||| ||||||| ||||| Sbjct 1456481 GCCCTCCCCTGTGCCCTGCTTGGCATGAACTC-CAATCTCATGAAGCAGTACATTGAGTT 1456423 Query 52709 TGTGGCGGATCGTCTGTTGGT-GCAGCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAAT 52766 ||| || || |||||| | || ||| ||||| || | | ||| || ||| || ||| Sbjct 1456422 TGTCGCTGACCGTCTGCTCGTCGCA-CTCGG-CAACGAGAAGGTCTACAAGGCCACCAAC 1456365 Query 52767 CCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGA 52826 || || || || ||| | ||||| || |||| |||||||||||||| ||||||||||| Sbjct 1456364 CCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGT 1456305 Query 52827 GTCG 52830 |||| Sbjct 1456304 GTCG 1456301 >seq11 Length=779747 Score = 118 bits (130), Expect = 1e-21 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||||||| || || |||||||| || ||||| | | Sbjct 735634 GACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCA 735575 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || || || || ||||| ||| || || | Sbjct 735574 AAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 735515 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||||||||| | || | ||| || || || || || || Sbjct 735514 TTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTG 735455 Query 138601 ACAAAAATCTGCATG 138615 || |||||||||||| Sbjct 735454 ACGAAAATCTGCATG 735440 >seq55 Length=1684425 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | || | ||| | || | | | |||||||| || ||||||||||||||| Sbjct 936954 CCGCCACGAAGTCGGAGAACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTC 937013 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || |||||| || || ||||| | |||| |||||||| ||||| || || Sbjct 937014 AAAGTGCGACCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGA 937073 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGT-TTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| ||| | || | || | | || | ||||| | || || || Sbjct 937074 ATACCCTCCTTGTC-TTGAATCTTGCTCTTCACGTTATCAATAGTGTCACTTGATTCGAC 937132 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || | || || ||||| ||||| || |||||||||||||| Sbjct 937133 CTCGAGGGTGATAGTCTTTCCAGTGAGAGTCTTGACAAAAATCTGCAT 937180 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | ||| || || | |||||||||| |||||||||||||| Sbjct 937182 CCACCACGCAGACGAAGAACCAAGTGCAGAGTTGACTCCTTCTGAATGTTGTAGTCAGAA 937241 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| |||||| ||||| || |||| |||| || ||||||||||| ||||| Sbjct 937242 AGGGTACGTCCGTCCTCCAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGGTCAGGAGGA 937301 Query 138508 ATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || || || ||| || | || |||| || | |||||| | ||||| || Sbjct 937302 ATACCCTCCTTATCCTGGATCTTACTCTTCACATTG-TCGATGGTGTCAGATGACTCAAC 937360 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || | || || || || | || || || || || ||||| Sbjct 937361 CTCGAGGGTTATGGTCTTGCCGGTTAAGGTCTTGACGAAGATTTGCAT 937408 >seq1 Length=5443851 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/183 (71%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||| | ||| || |||||||| || ||||| | ||| Sbjct 4488632 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 4488573 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543 | || |||||||||||||| || || || || ||||| ||| || || | |||| Sbjct 4488572 TCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG- 4488514 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | |||||| | ||||| ||||||| || | || || || ||||| || || || Sbjct 4488513 TCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACG 4488454 Query 138604 AAA 138606 ||| Sbjct 4488453 AAA 4488451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262009193360