Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq55 111 1e-19 >seq55 Length=1684425 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||||||||| || || || |||||||| ||||| | | | | |||| || | || Sbjct 936978 TGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGACCGTCCTCCAGCTGC 937037 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || |||||| | || | |||||| ||||| ||||| || |||||||| ||| ||| Sbjct 937038 TTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCTTGAATCTTG 937097 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || || || | || ||||| || || ||| || || | ||| || || || || || Sbjct 937098 CTCTTCACGTTATCAATAGTGTCACTTGATTCGACCTCGAGGGTGATAGTCTTTCCAGTG 937157 Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177 ||||| || |||||||| |||||| Sbjct 937158 AGAGTCTTGACAAAAATCTGCATA 937181 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| |||||||| || || || ||||||||||| ||| | | | ||||| | || Sbjct 937715 ATGGAGGGTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTCAAGCTG 937774 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||||||||| | ||||| ||||| || || || || || |||||||| ||| || Sbjct 937775 CTTGCCAGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTT 937834 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || ||| | || ||||| ||| | || || |||| ||| ||||| || || || Sbjct 937835 GGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCTAGGGTGATGGTCTTGCCGGT 937894 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 || || || || || |||||||| Sbjct 937895 CAAGGTCTTGACGAAGATTTGCAT 937918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391725589955