Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq44 167 3e-36 >seq44 Length=2799272 Score = 167 bits (184), Expect = 3e-36 Identities = 665/1033 (64%), Gaps = 28/1033 (3%) Strand=Plus/Plus Query 115864 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGC 115923 |||||||| |||||||| || ||| || | | | || ||||||| ||||| ||| Sbjct 2094581 TTGACAACCTGGAACTCACCAGCAAGGACTCGGCGCTGGTAAATGTTGGAGGTGTAAGGC 2094640 Query 115924 TCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATG 115983 || |||||||| |||||||||| || || | || ||| || ||||| || || | | Sbjct 2094641 TCGAAGCACTCGTTGTTACCCAGAATCTGCGAAGTACTGGCAGTAGGCATAGGGGCGAGG 2094700 Query 115984 AGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTC-CTTGAGGGCG-TCCCAGTCGT 116041 || || ||||| |||| ||| | ||| | | | || || | | |||||||| Sbjct 2094701 AGCAGACTGTTACGGATACCGTGAGTCTTAA--CATCCTCTCGAAGACTCTCCCAGTCCC 2094758 Query 116042 AGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCG 116101 | | | || | | |||||| || |||||||| ||||| | || || || | Sbjct 2094759 AAAGGTCGGAAGGCTTGACGTTCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAG 2094818 Query 116102 ATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGA 116158 | |||| || || || || ||||| ||| ||||| | ||||| || || Sbjct 2094819 AACCCTTGAAGGTAGAGTAGGGACCCTCCTCCTTGGCCAACTGCACGGAG---GCAGTGA 2094875 Query 116159 GGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAAT 116218 |||| ||||| || || |||||||| || | || | | | |||||| || | Sbjct 2094876 GGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCTCTAGCCTCGGGAGACT 2094935 Query 116219 CAAACGCGAGACGGCACAA-AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATT 116277 |||| | | || || | || || |||| || ||||| |||||||| || || || Sbjct 2094936 CAAAGGGCATGCG-CAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAAGACCGATA 2094994 Query 116278 GGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATA 116337 || || || | ||| || || ||||| | || || || ||| |||||| Sbjct 2094995 GGTCGGTGACGCATGTTGCTGTTGCGAGCCTCTTGTACAGGGTAGTGATTGACATCGATG 2095054 Query 116338 ACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA 116397 | | | || | || | |||||||| ||| | ||| ||||| | | | ||| | Sbjct 2095055 ATCTTGTTCAAGTTGCGGACGACAACCTGACTGACCTGATGCAGCTTCTTGAAGTCATA- 2095113 Query 116398 CTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 116454 || || ||| || | ||| | ||| ||||| | || || || || || ||| Sbjct 2095114 --GCAAGCCTCATCGTAGTTGATGAAAGCAGGCAGGGCAAGGGAGGCAAGGTTGCAAACA 2095171 Query 116455 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATG 116514 | | |||||| || |||||| || || || || |||| ||| || || ||| Sbjct 2095172 GCGACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCACAGATTAGAGCTTCGGATG 2095231 Query 116515 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGC 116574 || || | |||||| || || ||| |||||| ||||||||||| ||||| | || Sbjct 2095232 GTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTACAGGCATCCTTGTAAAGCATGAAGGGG 2095291 Query 116575 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGT 116633 | || ||||| || |||| || || || || | ||| | | || | | || | | Sbjct 2095292 TTTCCGGTCTCGGTCTGGGCCTCAAGGATGGCATACCAAAGCTTCTGAGCCTTG----AT 2095347 Query 116634 GGCGTTGGCTCGC---CCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACC 116690 || ||| | | || ||| ||||||||| |||||||||||||||||||||| | Sbjct 2095348 GGACTTGCGACCCTTACCTTCCCTCTCGTACTTCTCGTAGAGGGCCTCAAACTCTTCA-C 2095406 Query 116691 CACAGC-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCT 116749 | ||| || | || || || || | || || | || | ||| | || || Sbjct 2095407 CGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGGCACATAAGGGTCCACTCTCCGTTCT 2095466 Query 116750 CCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGC 116809 |||||| ||||||||||| || || ||||||||||| ||| ||| || || || || Sbjct 2095467 TCTCAACACGCTTCATGAAAAGATCAGGGATCCAGAGGGCCAGGAACAGGTCGCGGGCGC 2095526 Query 116810 GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCC 116869 | | || || | || || || || | || | || || | || ||| ||||||| Sbjct 2095527 GGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACATCAGCGTGCC 2095586 Query 116870 ACGGTTCCAGGTA 116882 | || || ||||| Sbjct 2095587 AAGGCTCTAGGTA 2095599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506716863080