Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31]
63 sequences; 42,866,936 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq44 167 3e-36
>seq44
Length=2799272
Score = 167 bits (184), Expect = 3e-36
Identities = 665/1033 (64%), Gaps = 28/1033 (3%)
Strand=Plus/Plus
Query 115864 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGC 115923
|||||||| |||||||| || ||| || | | | || ||||||| ||||| |||
Sbjct 2094581 TTGACAACCTGGAACTCACCAGCAAGGACTCGGCGCTGGTAAATGTTGGAGGTGTAAGGC 2094640
Query 115924 TCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATG 115983
|| |||||||| |||||||||| || || | || ||| || ||||| || || | |
Sbjct 2094641 TCGAAGCACTCGTTGTTACCCAGAATCTGCGAAGTACTGGCAGTAGGCATAGGGGCGAGG 2094700
Query 115984 AGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTC-CTTGAGGGCG-TCCCAGTCGT 116041
|| || ||||| |||| ||| | ||| | | | || || | | ||||||||
Sbjct 2094701 AGCAGACTGTTACGGATACCGTGAGTCTTAA--CATCCTCTCGAAGACTCTCCCAGTCCC 2094758
Query 116042 AGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCG 116101
| | | || | | |||||| || |||||||| ||||| | || || || |
Sbjct 2094759 AAAGGTCGGAAGGCTTGACGTTCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAG 2094818
Query 116102 ATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGA 116158
| |||| || || || || ||||| ||| ||||| | ||||| || ||
Sbjct 2094819 AACCCTTGAAGGTAGAGTAGGGACCCTCCTCCTTGGCCAACTGCACGGAG---GCAGTGA 2094875
Query 116159 GGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAAT 116218
|||| ||||| || || |||||||| || | || | | | |||||| || |
Sbjct 2094876 GGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCTCTAGCCTCGGGAGACT 2094935
Query 116219 CAAACGCGAGACGGCACAA-AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATT 116277
|||| | | || || | || || |||| || ||||| |||||||| || || ||
Sbjct 2094936 CAAAGGGCATGCG-CAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAAGACCGATA 2094994
Query 116278 GGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATA 116337
|| || || | ||| || || ||||| | || || || ||| ||||||
Sbjct 2094995 GGTCGGTGACGCATGTTGCTGTTGCGAGCCTCTTGTACAGGGTAGTGATTGACATCGATG 2095054
Query 116338 ACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA 116397
| | | || | || | |||||||| ||| | ||| ||||| | | | ||| |
Sbjct 2095055 ATCTTGTTCAAGTTGCGGACGACAACCTGACTGACCTGATGCAGCTTCTTGAAGTCATA- 2095113
Query 116398 CTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 116454
|| || ||| || | ||| | ||| ||||| | || || || || || |||
Sbjct 2095114 --GCAAGCCTCATCGTAGTTGATGAAAGCAGGCAGGGCAAGGGAGGCAAGGTTGCAAACA 2095171
Query 116455 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATG 116514
| | |||||| || |||||| || || || || |||| ||| || || |||
Sbjct 2095172 GCGACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCACAGATTAGAGCTTCGGATG 2095231
Query 116515 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGC 116574
|| || | |||||| || || ||| |||||| ||||||||||| ||||| | ||
Sbjct 2095232 GTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTACAGGCATCCTTGTAAAGCATGAAGGGG 2095291
Query 116575 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGT 116633
| || ||||| || |||| || || || || | ||| | | || | | || | |
Sbjct 2095292 TTTCCGGTCTCGGTCTGGGCCTCAAGGATGGCATACCAAAGCTTCTGAGCCTTG----AT 2095347
Query 116634 GGCGTTGGCTCGC---CCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACC 116690
|| ||| | | || ||| ||||||||| |||||||||||||||||||||| |
Sbjct 2095348 GGACTTGCGACCCTTACCTTCCCTCTCGTACTTCTCGTAGAGGGCCTCAAACTCTTCA-C 2095406
Query 116691 CACAGC-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCT 116749
| ||| || | || || || || | || || | || | ||| | || ||
Sbjct 2095407 CGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGGCACATAAGGGTCCACTCTCCGTTCT 2095466
Query 116750 CCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGC 116809
|||||| ||||||||||| || || ||||||||||| ||| ||| || || || ||
Sbjct 2095467 TCTCAACACGCTTCATGAAAAGATCAGGGATCCAGAGGGCCAGGAACAGGTCGCGGGCGC 2095526
Query 116810 GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCC 116869
| | || || | || || || || | || | || || | || ||| |||||||
Sbjct 2095527 GGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACATCAGCGTGCC 2095586
Query 116870 ACGGTTCCAGGTA 116882
| || || |||||
Sbjct 2095587 AAGGCTCTAGGTA 2095599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506716863080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |