Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq61 158 2e-33 >seq61 Length=1579179 Score = 158 bits (174), Expect = 2e-33 Identities = 365/544 (67%), Gaps = 17/544 (3%) Strand=Plus/Plus Query 159628 CTTCTTGTATT--GCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATT 159685 ||||| ||| | ||||||| ||||||||| |||||||||||||| | | || || Sbjct 1456287 CTTCTGGTAGTCAGCGACACG--CTTCTCGAAGAAGTTGGTCTTGCCACCAAGAGAGATG 1456344 Query 159686 GATTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCC 159745 |||||||| |||| ||||| | | | ||| |||| ||||| || | Sbjct 1456345 TTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAGTGCGACG 1456404 Query 159746 AGCAACCTGTCTGCCACAAATTCGATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAG 159804 |||| | ||| || ||||| || ||||| || | ||| | | |||| || || || Sbjct 1456405 AGCAGACGGTCAGCGACAAACTCAATGTA-CTGCTTCATGAGATTGGAGTTCATGCCAAG 1456463 Query 159805 CAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCAC 159864 ||| | |||||| || || | || ||||||| |||||| ||| || || | Sbjct 1456464 CAGGGCACAGGGGAGGGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCACAAAT 1456523 Query 159865 AATCTGCGAGA----CACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGA 159920 || | | || | || || | |||| || | |||| | || | | Sbjct 1456524 GATGTCCTGGATCATCTGCTTGCTAGCACGGC----CCTTGAGGTGGGAGTGAA---GAA 1456576 Query 159921 GGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGA 159980 |||| || |||||| ||| || ||||| || |||||||||| ||||||||| | | | | Sbjct 1456577 GGCAGGCGAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCA 1456636 Query 159981 GGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAA 160040 | || ||||||| |||||| |||||||| || |||| ||||| ||||| || || | Sbjct 1456637 GACCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGA 1456696 Query 160041 AGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCAT 160100 |||| ||||| || || || || || || || | || |||| | | || |||| | Sbjct 1456697 AGATACCCTCGACAGCAGCGAAGGCAACCAGACGCTGGGCAAAGGTAGAGTCCTTGTCCT 1456756 Query 160101 GGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGT 160160 || |||| | ||||||| |||||||||||| |||||| || ||| || || |||| Sbjct 1456757 GGATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTATCAACAGCGT 1456816 Query 160161 TAAA 160164 | || Sbjct 1456817 TGAA 1456820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154573815280