Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2 235 7e-57 >seq2 Length=1465436 Score = 235 bits (260), Expect = 7e-57 Identities = 459/677 (68%), Gaps = 6/677 (1%) Strand=Plus/Minus Query 7409 TTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCA 7468 || || || ||||| ||||| | | |||||| | | || | ||||| || ||| Sbjct 1403410 TTGTGCTTGCGTTTGAACTCGTTAACGAAGTGGCTGACCAGACGGTTGTCGAAGTCCTCA 1403351 Query 7469 CCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTT 7528 ||||||||||| || || || ||||| | ||||| || |||||||| | |||||| | Sbjct 1403350 CCACCCAAGTGAGTGTCACCAGCGGTAGACTTGACCTCGAAGATACCCTCCTCAATGGTG 1403291 Query 7529 AACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCG 7588 | | |||||||| || ||||||||||| || || || ||||| ||||| || | Sbjct 1403290 AGGAGAGAAACATCGAAGGTACCACCACCGAGATCGAAGATGAGGACGTTGCGCTCACCC 1403231 Query 7589 TCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGA 7648 || ||||| || |||||||| || || || || || || || || || ||||| || Sbjct 1403230 TCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCGGTGGGCTCGTTGATAATTCGG 1403171 Query 7649 AGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTA 7708 ||| ||| ||||| || || | ||||| || || || || || || || ||||| Sbjct 1403170 AGAACGTTGAGGCCGGCGATGAGACCAGCATCCTTGGTAGCCTGACGCTGAGAGTCGTTG 1403111 Query 7709 AAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCG 7768 |||||||| ||||| || || || |||| |||| ||| |||||| || || || || Sbjct 1403110 AAGTAGGCAGGGACGGTGACAACGGCGTTGTTGACAGTCTCACCGAGGTAAGACTCAGCA 1403051 Query 7769 ATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTT 7828 | || ||| ||||| || | ||| | || ||||| || | | || | ||| | Sbjct 1403050 GTCTCACGCATCTTGGTGAGGATCATGGCAGAGATCTCCTCGGGAGTGAAGTTCTTCTTC 1402991 Query 7829 TCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATAC 7888 ||||| || || ||||| || || | ||| || |||| | ||| | | | Sbjct 1402990 TCACCCTTGAACTCAACCTCGATGACGGGCTT---GCCAGCCTTGTCGATGATGGTGAAG 1402934 Query 7889 GACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGC 7948 | | | ||||||||| | ||||||| || | ||||| | ||||| | ||| Sbjct 1402933 GGGAAGTGCTTCATATCGGCCTGGACCTCAGCATCGGCGAACTTGCGACCGATCAATCGC 1402874 Query 7949 TTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCG 8008 || || || || || ||||| | |||||||||||| |||||||| || || || || Sbjct 1402873 TTGGCGTCGAAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTCTTGGCGGCATCTCCA 1402814 Query 8009 ATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGG 8068 || ||||| || | || || || ||||| | || ||||| || || || || ||| Sbjct 1402813 ATGAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGTAGTGCGGTTACCCTGG 1402757 Query 8069 TCGTTCGCAATAATTTC 8085 ||||| || || || || Sbjct 1402756 TCGTTGGCGATGATATC 1402740 Score = 154 bits (170), Expect = 2e-32 Identities = 365/545 (67%), Gaps = 15/545 (3%) Strand=Plus/Minus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| ||||| |||||||| |||| | | ||| || |||||||| | | || Sbjct 1103957 AGGTCCTCGAAACGGGCACGGGTGATGGTCATCTGGAAGTCCTCGCCGTCGAAGAGAGAG 1103898 Query 7304 TCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 || || |||||||| | || || || | ||| || ||||| || |||||||| | Sbjct 1103897 TCGATCTCAATGGTGGCCTGGGCACCGCTGGAGAGG--GTACGCTTGGCACGCTCACAAG 1103840 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 | ||||| | ||| || |||||||| | | || || | || || ||| || || Sbjct 1103839 CAGTTCGGAGACGTCGGAGGGCACGGGCATCGCCAGAGAGGTCCTTTTTAGCCTTGCGGG 1103780 Query 7422 TAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 | ||||| | | |||| |||| |||| | | ||||| || | |||||||| || Sbjct 1103779 TGAACTCCTTCTTGCAGTGATCGA-GGAGGTTTGTGTCGAAGTCCTGGCCACCCAAATGG 1103721 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 ||||| || || || || ||||| |||| ||| || | ||||| | | || ||| Sbjct 1103720 GTATCACCAGCAGTGGCCTTGACAGTGAAGACACCACCCTGGATGTTCAGGAGGGAGACA 1103661 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTA 7600 || || ||||||||||| || || | ||||| ||||| || | || | | |||| Sbjct 1103660 TCGAAAGTACCACCACCGAGATCGTAGATGAGGACGTTGCGCTC--CTTC-TCGGACTTA 1103604 Query 7601 TCG------AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 || |||||||| || || || || || || || || || || ||||| || | Sbjct 1103603 CCGGCACCAAGACCGTAGGCAATGGCGGCGGCGGTAGGCTCGTTGATGATACGGAGGACG 1103544 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 || || || || || | | || ||||| || || || || || ||||| |||||| Sbjct 1103543 TTAAGACCGGCGATGGAACCGGCGTCTTTGGTGGCCTGACGCTGGTTGTCGTTGAAGTAG 1103484 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || ||||| || | ||| || | | ||| ||||| || || | | || || || || Sbjct 1103483 GCAGGGACAGTGATGACGGCCTTCTCGACCTTCTTGCCAAGCTTGGTCTCGGCAATCTCC 1103424 Query 7775 TTCAT 7779 ||||| Sbjct 1103423 TTCAT 1103419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132299832920