Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq44 219 5e-52 seq7 122 1e-22 seq12 105 8e-18 seq61 87.8 2e-12 >seq44 Length=2799272 Score = 219 bits (242), Expect = 5e-52 Identities = 1080/1700 (64%), Gaps = 57/1700 (3%) Strand=Plus/Plus Query 109399 GCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGC 109458 |||| | |||||| || ||||| || || ||||||||| |||||| | | ||| Sbjct 2094266 GCCTGTGTGCGAAGGTAGTACATGCCAGTCTTGAGACCAAGCTTCCAGCCAGCGAAGTGC 2094325 Query 109459 ATTGAAGAGAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGA 109518 || | || ||| | || ||| || ||| | ||| | || || |||||| Sbjct 2094326 ATGCTGGTGATCTTGCCCATCGTGGGATCCTTCATGTGAATGTTGAGGGATTGGGACTGA 2094385 Query 109519 TCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCT----AATTTC 109574 ||||||||| ||| || || || ||||| | || | | | ||| ||| || Sbjct 2094386 TCGATGAATGCACCTCGGTCGGCAGCCATCTGGACAA----CCTGGCGCTGAGAAATCTC 2094441 Query 109575 CCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGA 109634 ||| ||||||||||| | | ||||| || | || || | |||||| |||||||| Sbjct 2094442 CCAAACAGTCTTGTAAAGAGCCTTGACGTCGGCAGGGATATTGGGGATGTTCTGAATAGA 2094501 Query 109635 GCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAG 109694 || | | | || | | |||||| | | ||||| | || | | || Sbjct 2094502 ACCGTTATCGGAAATAATACGGTTCTTCATGGCATCAGACCACAAGCCCATGTCGACAAG 2094561 Query 109695 ATCGT----CAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGA 109750 ||| | |||| || | ||||| || || ||||||||||| || || Sbjct 2094562 ATCTTTGAGCAACCAGGGG----TTGACAACCTGGAACTCACCAGCAAGGACTCGGCGCT 2094617 Query 109751 GGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGG 109810 |||| ||||| | ||||| || ||||| ||||| ||||| || || || || | ||| Sbjct 2094618 GGTAAATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTACCCAGAATCTGCGAAGTAC 2094677 Query 109811 AAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCT 109870 || || ||||| || || | ||| |||||||| |||| ||| | ||||| || || Sbjct 2094678 TGGCAGTAGGCATAGGGGCGAGGAGCAGACTGTTACGGATACCGTGAGTCTTAACATCCT 2094737 Query 109871 CACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTG 109930 | || | ||||| || || | | | | || | | |||||| || Sbjct 2094738 CTCGAAGACTCTCCCAGTCCCAAAGGTCGGAA------GGCTTGACGTTCCACATGTCGA 2094791 Query 109931 GTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCT 109990 || || | |||||||| || |||||||||||||| | ||| | ||||| ||| Sbjct 2094792 ACTGGAGAATACCCTCAGAGGCGGGAGAACCCTTGAAGGTAGAGTAGGGACCCTCCTCCT 2094851 Query 109991 CGGCCAACTCGGATGAAGCCTCT-AGTGCCGCATGATACATAGTCTCAAAAATATGAGCA 110049 |||||||| | | | || | | || || || || || || |||||||| || || Sbjct 2094852 TGGCCAACT-GCACGGAGGCAGTGAGGGCAGCGTGGTAGATGGTCTCAAAGATCTGC--- 2094907 Query 110050 TTCATGAGG---CGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG-AATAAACACATC 110105 || |||| | || ||| | | || ||||| | | || || || || |||| Sbjct 2094908 TTGTTGAGCTCTCTAGCCTCGGGAGACTCAAAGGGCATGCG-CAGAGCAAGGAAAGCATC 2094966 Query 110106 CGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGT 110165 || |||||||| ||||| ||||| || || || || |||||| | ||||| Sbjct 2094967 AGCAAGACCCTGGACACCAAGACCGATAGGTCGGTGACGCATGTTGCTGTTGCGAGCCTC 2095026 Query 110166 TTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGT 110225 || ||| ||||| ||| ||||||| | || | || ||| || | Sbjct 2095027 TTGTACAGGGTAGTGATTGACATCGATGATCTTGTTCAAGTTGCGGACGACAACCTGACT 2095086 Query 110226 GATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA-TTGACATATTTGGGGA 110284 || | ||| || || | | | || | | | || | || |||| | || | Sbjct 2095087 GACCTGATGCAGCTTCTTGAAGTCATA-GCAAGCCTCATCGTAGTTGATGAAAGCAGGCA 2095145 Query 110285 GAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTT 110344 | |||| || ||||| ||||| |||| ||| || | | ||| || | || | Sbjct 2095146 GGGCAAGGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCACAGTACTCGATGATCT 2095205 Query 110345 CCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGC 110404 | || |||| || || || ||| ||| | ||||||||| || ||| ||| | Sbjct 2095206 CAGTGCACAGATTAGAGCTTCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTAC 2095265 Query 110405 ATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCT 110464 | |||||||| || |||||| | ||| | || || || ||||| | || || ||||| | Sbjct 2095266 AGGCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCAAGGATGGCAT 2095325 Query 110465 TCCATA-CATCGGCGGCGGG---GACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTG 110520 ||| | | || | | | | ||| ||||| | | ||||||| ||||||||| Sbjct 2095326 ACCAAAGCTTCTGAGCCTTGATGGAC--TTGCG--ACCCTTACCTTCCCTCTCGTACTTC 2095381 Query 110521 GTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGA 110580 ||| | | ||||||| || | ||||| || | |||||| || || ||| Sbjct 2095382 TCGTAGAGGGCCTCAAACTCTTCACCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGG 2095441 Query 110581 CAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCAC 110640 || | |||| ||| | ||| || |||||| | ||||||||| || ||||| ||||| Sbjct 2095442 CACATAAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAG 2095501 Query 110641 ATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCC 110700 | ||| ||| ||||| ||| || |||| || | ||| ||||| || || || Sbjct 2095502 AGGGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCA 2095561 Query 110701 AAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGA 110760 | || || | || ||| | |||||| || || || |||| || | | || | | Sbjct 2095562 AGGAACTCGAAGACATCAGCGTGCCAAGGCTCTAGGTAGATGGCAAAAGCACC---AGGT 2095618 Query 110761 CG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGA 110814 || ||| |||| | ||| ||||| || ||| |||||||| | ||||||||| Sbjct 2095619 CGCTTGTTACCACCCTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCATAGGA 2095678 Query 110815 ATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCG 110874 | || || | |||| ||| || ||||| ||| ||| | ||||||| || | Sbjct 2095679 ACAACACCGTTGGATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGATTCGG 2095738 Query 110875 TGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGT 110933 ||| || | |||||||||||| ||| ||| ||| ||||| ||| |||| || Sbjct 2095739 TGGGCATTGAGACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCT-TGAGGGT 2095797 Query 110934 ACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTG 110993 | |||| ||||| ||||| || |||| || ||| | ||||| || || | ||| Sbjct 2095798 ATCATAGATACCGTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAGGAAAGCTG 2095857 Query 110994 AGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--G 111051 || |||| || || ||||||||||| || || | ||||| ||| ||| |||| | Sbjct 2095858 GGGTTGAGGGGTACCAGCATTGAAGAGGGTGGGGGAAGCATGGGTGA--AGAACTTGCTG 2095915 Query 111052 GACATCTTGTTGTATGTGTC 111071 ||||| ||| ||||| || Sbjct 2095916 GACATAAGGTTATATGTCTC 2095935 >seq7 Length=1018574 Score = 122 bits (134), Expect = 1e-22 Identities = 189/264 (72%), Gaps = 6/264 (2%) Strand=Plus/Plus Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCA 11796 || |||||||| || ||||| ||||||||||| ||||| ||||| | || || | || Sbjct 328214 AAGAGTTCACGGACTCGCTTGGCTCCAACACCAACGAAGATCTCGTCAAA-TTCACTGCC 328272 Query 11797 GAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855 | ||| | | ||| |||||| || |||||||| | |||||||||||||| ||||| Sbjct 328273 GGACATGTAGAAGAACGGAACACCAGCTTCACCAGCAACAGCTCGAGCGAGGAGCGTCTT 328332 Query 11856 ACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC-ACTTC-CA 11913 ||| |||||||| | |||| | || ||| | || ||| | |||||||| | || | Sbjct 328333 ACCGGTACCAGGAGGACCAACCAGGAGGACACCCTTGGGAAGTTTGGCACCGAGGTCGCT 328392 Query 11914 AAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAG 11973 || | ||||| ||||| || || || || | |||| |||||||||||||| Sbjct 328393 AA--ACTTTTCAGGGTTCTTCAGAAACTCGACGACTTCCTGGAGTTCCTCCTTGGCTTCA 328450 Query 11974 TCGATACCCTCAACATCGGTGAAA 11997 || ||| | |||||| ||||| Sbjct 328451 TCACAACCGTGGACATCGTTGAAA 328474 >seq12 Length=4630793 Score = 105 bits (116), Expect = 8e-18 Identities = 259/383 (68%), Gaps = 30/383 (8%) Strand=Plus/Minus Query 11588 TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTT-- 11645 ||| |||||| |||||||| ||||||| |||||| | || ||| ||||| ||||| Sbjct 1666909 TGTTGAAACCATCCATTTCAGTGAGAATCTGGTTCAGGGTTGCTTCCCGCTCGTCGTTAC 1666850 Query 11646 ----GGAG----GGCATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCG 11697 | || ||| | |||| || | | || | | |||||||| |||||| Sbjct 1666849 CACCGAAGCCTCGGCCACTCTCCTGTCGGGCACGTC----CAATTGCGTCAATTTCATCG 1666794 Query 11698 ATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCG---AAAAGTTCACGTACACGC 11754 ||||| | |||||| || || || ||| |||| || || || || ||||| Sbjct 1666793 ATGAAGATGATACAGGGAGCATTCTTGCG-GCC--TTCGGCAAACAGATCTCGCACACGA 1666737 Query 11755 TTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG--CGGCAGAACACTGAATGAAGG 11812 | || ||||| ||||||||||||||||| | | | || |||||||| ||||| Sbjct 1666736 GAAGGACCGACACCCACGAACATCTCAACGAATTCGGAACCGC-TCACACTGAA-GAAGG 1666679 Query 11813 GAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCAC 11872 | || |||||| ||||| |||| || || | |||||||| |||||||| | | Sbjct 1666678 GCACTCCAGACTCGCCAGCCGTGGCCTTGGCAAGCAACGTCTTACCAGTACCAGGAGGGC 1666619 Query 11873 CAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTC-CAAAGTAGCGCTCAGGCT 11929 |||| || | || || || || |||||||| || |||| | || | |||||||| Sbjct 1666618 CAGCCAGGATAGCACCTCGAGGAATCTTGGCGCCCAGCTTCTCGAACT---TCTCAGGCT 1666562 Query 11930 TCTTGAGGAAGTCCACAATCTCC 11952 ||| |||||| |||| |||| Sbjct 1666561 GCTTCAGGAAGCTAACAAACTCC 1666539 >seq61 Length=1579179 Score = 87.8 bits (96), Expect = 2e-12 Identities = 118/162 (73%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 ||||| || ||||| |||||||||||||| || |||| || || |||||||| || Sbjct 1456594 TGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGGCCA 1456653 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||||| ||| ||| |||||||| ||||| ||| Sbjct 1456654 CGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAGATACCCTCGACAGCA 1456713 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC 119668 ||||| || | ||||||| || |||||| ||| |||||| Sbjct 1456714 GCGAAGGCAACCAGACGCTGGGC-AAAGGTAGAGTCCTTGTC 1456754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975536181400