Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq44 228 1e-54 seq7 104 3e-17 >seq44 Length=2799272 Score = 228 bits (252), Expect = 1e-54 Identities = 571/860 (66%), Gaps = 23/860 (3%) Strand=Plus/Plus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 || ||||| | || || | ||||||||||| |||||| | |||||| | Sbjct 2095142 GGCAGGGCAAGGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCACAGTACTCGATG 2095201 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || |||| || || || || || || | ||||| ||||| ||||| | Sbjct 2095202 ATCTCAGTGCACAGATTAGAGCTTCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGG 2095261 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 || || ||||||||||| |||||| |||| | || ||||| ||||| | || || || Sbjct 2095262 TTACAGGCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCAAGGATG 2095321 Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGG--CCCGTCCCTCCGC-CTCGTA 106692 || | ||| | | || | | || | |||| ||| ||| | ||| | | |||||| Sbjct 2095322 GCATACCAAAGCTTCTGAGCCTTG----ATGGACTTGCGACCCTTACCTTCCCTCTCGTA 2095377 Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 106752 ||| ||||||||| |||||||| ||||| ||||| ||||| || || || Sbjct 2095378 CTTCTCGTAGAGGGCCTCAAACTCTTCACCGTAGCAGTCGGCAAGACCAGGGCACTCGTT 2095437 Query 106753 TGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 106812 || || | ||| | ||| | || || |||||| |||||||||||||| || || || Sbjct 2095438 GGGGCACATAAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGAT 2095497 Query 106813 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 106872 ||| |||| || || || | || |||| || | ||| ||||| ||| | Sbjct 2095498 CCAGAGGGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAG 2095557 Query 106873 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTT 106932 ||||||||||| | || ||| |||||||| ||||| || |||| || | || || Sbjct 2095558 ATCAAGGAACTCGAAGACATCAGCGTGCCAAGGCTCTAGGTAGATGGCAAAAGCACCAGG 2095617 Query 106933 TCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG 106989 ||| ||| | |||| || ||||| || ||| ||| || || || ||||| || Sbjct 2095618 TCGCTTGTTACCACCCTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCATAGG 2095677 Query 106990 AATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATC 107049 || || ||| | ||| ||| || || || ||| || | ||| ||| Sbjct 2095678 AACAACACCGTTGGATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGG----CACGGA 2095733 Query 107050 ATGGATGTGCAT----CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 107105 | | || |||| |||||||| |||||| ||| || || ||||| | | | Sbjct 2095734 TTCGGTGGGCATTGAGACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGA 2095793 Query 107106 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 107165 | || |||||||||||| || ||||||||| || | | | |||||| ||| | Sbjct 2095794 GGGTATCATAGATACCGTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAGGAAA 2095853 Query 107166 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT 107225 ||| ||| || |||||||||||||||||||| || | || || ||| | | ||| Sbjct 2095854 GCTGGGGTTGAGGGGTACCAGCATTGAAGAGGGTGGGGGAAGCATGGGTGA--AGAACTT 2095911 Query 107226 G--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGAT 107283 | |||||| || |||||||||| |||| ||||| || || || |||||| || Sbjct 2095912 GCTGGACATAAGGTTATATGTCTCCACGACACGCTCAATATCATCACCCCAGATGCCAAT 2095971 Query 107284 GGCCACACGCATAAACATGT 107303 | ||||||||| | ||||| Sbjct 2095972 AGACACACGCATGATCATGT 2095991 >seq7 Length=1018574 Score = 104 bits (114), Expect = 3e-17 Identities = 163/230 (71%), Gaps = 10/230 (4%) Strand=Plus/Plus Query 9371 GGCATCAATCTCATCAATGAAGACAATACATGG----TTGATTTTCGCGGGCGATTTCAA 9426 |||||||| || || |||||||||||| | || ||| | || |||| | || Sbjct 328159 GGCATCAAGTTCGTCGATGAAGACAATAGAGGGAGACTTGTTCTTGGCGGCAG----TAA 328214 Query 9427 AGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGG 9486 |||| || || || | ||||| || |||||||| || ||||| |||| || | || | Sbjct 328215 AGAGTTCACGGACTCGCTTGGCTCCAACACCAACGAAGATCTCGTCAAA-TTCACTGCCG 328273 Query 9487 AACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTA 9545 |||| | || ||| || ||| || |||||| |||| ||||| ||||| || |||||| Sbjct 328274 GACATGTAGAAGAACGGAACACCAGCTTCACCAGCAACAGCTCGAGCGAGGAGCGTCTTA 328333 Query 9546 CCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 || ||||| || ||| | |||||| ||||| |||| ||||| || Sbjct 328334 CCGGTACCAGGAGGACCAACCAGGAGGACACCCTTGGGAAGTTTGGCACC 328383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980335390120