Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 4e-15 >seq4 Length=1130759 Score = 96.9 bits (106), Expect = 4e-15 Identities = 260/397 (65%), Gaps = 3/397 (1%) Strand=Plus/Minus Query 154711 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGG 154770 |||| || || |||| || | || || || || || || ||||| |||| ||||| Sbjct 270851 GAAAGGTTTGCCTGATCCCTGTTTCTGCTCACGGTACCAACCCTGCCTCCGCTGCCATGG 270792 Query 154771 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGA---TGGTAACATAGACATCAAAG 154827 | || ||||| || || |||||||||||| | | | ||||||| | ||| || | | Sbjct 270791 CCGGTATGAAGGTCGTCACTGTCAAGTGTGACGCTAAAACTGGTAACCTGGACGTCGAGG 270732 Query 154828 ATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACC 154887 |||| || || ||| | | | |||||| | | || ||| ||||||||| Sbjct 270731 ATCTCAAGGCCAAGTGCGTCAAGCACGCCGATGAACTTGCTGGCATCATGGTTACATACC 270672 Query 154888 CATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACA 154947 | || || |||||| || || | | || | ||| | || | |||| || || Sbjct 270671 CTTCCACCTTTGGTGTCTTCGAGCCCGAGATCAAGCAGGTCTGCGACCTCGTCCACGAGC 270612 Query 154948 ATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAAC 155007 |||| |||| || || | || || || || | || || ||| | || || | | Sbjct 270611 ATGGCGGTCTCGTCTACATGGACGGTGCCAACATGAACGCCCAGATTGGTCTCTGCAGCC 270552 Query 155008 CATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCAC 155067 | |||| || || ||||| || ||||| ||| | || || || ||||| ||||| | Sbjct 270551 CCGGTGACATCGGCGCTGATGTCTGCCATCTCAACCTCCACAAGACTTTCTGCATTCCCC 270492 Query 155068 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 | || ||||| || || || || |||||||| | ||| Sbjct 270491 ACGGTGGTGGTGGCCCCGGTGTTGGTCCTATCGCTGT 270455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212343869920