Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq4 111 2e-19 >seq4 Length=1130759 Score = 111 bits (122), Expect = 2e-19 Identities = 263/397 (66%), Gaps = 3/397 (1%) Strand=Plus/Minus Query 159386 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGG 159445 |||| || || |||| || | || || || || || || ||||| || || | |||| Sbjct 270851 GAAAGGTTTGCCTGATCCCTGTTTCTGCTCACGGTACCAACCCTGCCTCCGCTGCCATGG 270792 Query 159446 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGA---TGGCAACATAGACATCAAAG 159502 | || ||||| || || |||||||||||| | | | ||| ||| | ||| || | | Sbjct 270791 CCGGTATGAAGGTCGTCACTGTCAAGTGTGACGCTAAAACTGGTAACCTGGACGTCGAGG 270732 Query 159503 ATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATC 159562 |||| || || ||| | | | |||||| | | || ||| ||||||| | Sbjct 270731 ATCTCAAGGCCAAGTGCGTCAAGCACGCCGATGAACTTGCTGGCATCATGGTTACATACC 270672 Query 159563 CATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGA 159622 | || || |||||| || || | | |||| ||| | || | | || || ||| Sbjct 270671 CTTCCACCTTTGGTGTCTTCGAGCCCGAGATCAAGCAGGTCTGCGACCTCGTCCACGAGC 270612 Query 159623 ATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAAC 159682 |||| |||| || || | || ||||| || | || || ||| | ||||| | | Sbjct 270611 ATGGCGGTCTCGTCTACATGGACGGTGCCAACATGAACGCCCAGATTGGTCTCTGCAGCC 270552 Query 159683 CATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCAC 159742 | ||||| || || ||||| || ||||| ||| | || ||||| ||||| ||||| | Sbjct 270551 CCGGTGACATCGGCGCTGATGTCTGCCATCTCAACCTCCACAAGACTTTCTGCATTCCCC 270492 Query 159743 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 | || ||||| || || || || |||||||| | ||| Sbjct 270491 ACGGTGGTGGTGGCCCCGGTGTTGGTCCTATCGCTGT 270455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050736909680