Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq23 91.5 1e-13 >seq23 Length=3254394 Score = 91.5 bits (100), Expect = 1e-13 Identities = 199/293 (68%), Gaps = 15/293 (5%) Strand=Plus/Minus Query 29686 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGTTCTCCACC 29745 |||||||| ||||||| | || |||||| ||||| || | |||| | | |||||| Sbjct 1172701 TGAGGGTCATAACCCTTGACGGTGAAATCTTCTGCTTTCCAACCGTCGATACT-TCCACC 1172643 Query 29746 CTCCTGTTTATC-------CTC-AGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAG 29797 || ||| || ||| || |||||| || ||||| | ||| || || Sbjct 1172642 CT----TTTCTCGAGAAATCTCTAGCTCTGGAAAGTCTCGTGGCTCGCGCTCCAGTTGGA 1172587 Query 29798 TCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAA-AC 29856 |||| || | | ||||| || ||||| || ||||| || |||| |||| || || Sbjct 1172586 TCTTAAGAGCATTAACGTGGTCGAGGTACACATGAGCATCGCCCATAACGTGGGTAAGAC 1172527 Query 29857 TCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCG 29916 | ||| || | || | ||||| || | ||||| || | |||| ||| || || Sbjct 1172526 T-TCCAGGAACCAGGTCACAAACGTGCGCAAGCATGTGTGTCAATAGAGCGTAACTAGCA 1172468 Query 29917 ATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 29969 ||||| ||||| || ||||| |||||||| | ||||||||||| | |||||| Sbjct 1172467 ATGTTGAAGGGAACACCGAGACCCATGTCGCAAGACCTCTGGTACAACTGACA 1172415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617286258299