Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31]
63 sequences; 42,866,936 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq55 96.9 3e-15
>seq55
Length=1684425
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
||||||||||| || || || || ||||| ||| | ||| | | || |||| |||
Sbjct 936978 TGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGACCGTCCTCCAGCTGC 937037
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| || || || | |||||| || || || ||||| || || || |||||||| ||
Sbjct 937038 TTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCTTGAATCTTG 937097
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| || | || | ||||||| | ||| || || || |||| || || || ||
Sbjct 937098 CTCTTCACGTTATCAATAGTGTCACTTGATTCGACCTCGAGGGTGATAGTCTTTCCAGTG 937157
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| ||| || ||||| ||||||||
Sbjct 937158 AGAGTCTTGACAAAAATCTGCAT 937180
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| || || || || || || || || || ||||| || | | || | |
Sbjct 937193 ACGAAGAACCAAGTGCAGAGTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTACGTCC 937252
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
|| |||| |||||| || || || || | |||||||| || || ||||| || || ||
Sbjct 937253 GTCCTCCAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGGTCAGGAGGAATACCCTCCTT 937312
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
||| || || || || ||| | || | |||||||| | || || || || || |
Sbjct 937313 ATCCTGGATCTTACTCTTCACATTGTCGATGGTGTCAGATGACTCAACCTCGAGGGTTAT 937372
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| ||||||||||| || || || || || |||||
Sbjct 937373 GGTCTTGCCGGTTAAGGTCTTGACGAAGATTTGCAT 937408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396278095732491
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |