Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq44 385 9e-102 seq61 185 2e-41 >seq44 Length=2799272 Score = 385 bits (426), Expect = 9e-102 Identities = 943/1397 (68%), Gaps = 57/1397 (4%) Strand=Plus/Plus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | |||||| ||||| | || || | | |||||||| ||| || ||||| Sbjct 2094578 GGGTTGACAACCTGGAACTCACCAGCAAGGACTCGGCGCTGGTAAATGTTGGAGGTGTAA 2094637 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| || ||||||||| ||||||||||| | ||| ||||| || ||||| || || Sbjct 2094638 GGCTCGAAGCACTCGTTGTTACCCAGAATCTGCGAAGTACTGGCAGTAGGCATAGGGGCG 2094697 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGC-CGAAG-CTCTGCCCAGT 213084 | || |||||||| | | ||||| | | | | | ||||| |||| |||||| Sbjct 2094698 AGGAGCAGACTGTTACGGATACCGTGAGT-CTTAACATCCTCTCGAAGACTCT-CCCAGT 2094755 Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 |||| | | || ||| ||| |||||||||||||| ||||| | || || Sbjct 2094756 CCCAAAGGTCGGA-AGG--------CTTGACGTTCCACATGTCGAACTGGAGAATACC-- 2094804 Query 213145 TGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCG 213200 |||| |||| |||| | | | |||||||| || | ||||||||||| || | Sbjct 2094805 --CTCAGAGGCGGGAGAACCCTTGAAGGTAGAGTAGGGACCCTCCTCCTTGGCCAACT-G 2094861 Query 213201 CA-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTT 213259 || ||| || |||||||||| ||||||||| ||||| |||| | ||||||||| | Sbjct 2094862 CACGGAGGCAGTGAGGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCTCT 2094921 Query 213260 GGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGAC 213319 ||||| || ||| |||||||| || |||| ||||||| || |||||||| Sbjct 2094922 AGCCTCGGGAGACTCAAAGGGCATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGAC 2094981 Query 213320 CCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAA 213378 || | ||||| |||| ||| | || ||| ||| |||| ||| | | ||||| Sbjct 2094982 ACCAAGACCGATAGGTCGGTGACGCATGTTGCTGTTGCGAGC-CTCTTGTACAGGGTAGT 2095040 Query 213379 AGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGT 213438 ||| |||||||||||||| | ||||||| | | || | |||| || ||| | Sbjct 2095041 GATTGACATCGATGATCTTGTTCAAGTTGCGGACGACAACCTGACTGACCTGATGCAGCT 2095100 Query 213439 ACTCGTGATTGAACACGTAGCCCC--CGTCCTGCACAAACTCAGGCAGGGCGATGCTGGC 213496 || ||| | | |||| | ||| | | || |||||||||| | | ||| Sbjct 2095101 TCT--TGAAGTCATAGCAAGCCTCATCGTAGTTGATGAAAGCAGGCAGGGCAAGGGAGGC 2095158 Query 213497 CAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTT 213556 ||||||||||| || ||||| | || | | |||||| |||||||| |||||||| || Sbjct 2095159 AAGGTTGCAAACAGCGACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCACAGATT 2095218 Query 213557 GCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTTGT 213615 || ||||||||| || ||||||| ||||| ||| ||| | ||| |||||||| Sbjct 2095219 AGAGCTTCGGATGGTACCGAGGTTCTTCTGGTTGCTCTT-GCGGTTACAGGCATCCTTGT 2095277 Query 213616 AGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTA 213673 | |||||| ||||| |||||||| ||||| | | || || ||| ||| || | Sbjct 2095278 AAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCAAGGAT--GGCATACCAAAGCTT 2095335 Query 213674 CCTGGCCTTGACC-ACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGC 213731 | ||||||| || || ||| | | | | | |||||||| |||||||| Sbjct 2095336 CTGAGCCTTGATGGACTTGC--GACCCTTAC---CTTCCCTCTCGTACTTCTCGTAGAGG 2095390 Query 213732 TCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGG 213791 | | || || | || || | | || || || || ||| ||||| ||| Sbjct 2095391 GCCTCAAACTCTTCACCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGGCACATAAGG 2095450 Query 213792 CTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGT 213850 |||| || |||| | |||| || | || |||||| || || |||| ||| || || Sbjct 2095451 GTCCACTCTCCGTTCTTCTCA-ACACGCTTCATGAAAAGATCAGGGATCCAGAGGGCCAG 2095509 Query 213851 GAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTC 213910 ||||||||| | || | ||| ||| || ||| || || ||||| || || || Sbjct 2095510 GAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTC 2095569 Query 213911 AAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CC 213967 |||| || |||||||| ||||| | |||||||||||| || || || | |||| || Sbjct 2095570 GAAGACATCAGCGTGCCAAGGCTCTAGGTAGATGGCAAAAGCACCAGGTCGCTTGTTACC 2095629 Query 213968 GCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTT 214027 ||||| || || | ||| ||||||||| || || | || || | ||||| Sbjct 2095630 ACCCTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCATAGGAACAACACCGTT 2095689 Query 214028 GGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTCATGGA 214084 ||| ||| |||||||| || || || || ||||| | ||| | | | || ||| || Sbjct 2095690 GGA-TGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGATTCGGTGGGCATTGA 2095748 Query 214085 GAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGAT 214144 || || || ||||| || |||||| |||||||| ||| | | | || || ||| Sbjct 2095749 GA--CCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTATCATAGAT 2095806 Query 214145 GCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGA 214204 ||| | |||||||| || | | || | ||||||||| || |||||||| | || Sbjct 2095807 ACCGTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAGGAAAGCTGGGG--TTGA 2095864 Query 214205 CGAG--CCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGC 214262 | | |||| ||||| || |||||| |||||| | | |||||| | || | || Sbjct 2095865 GGGGTACCAGCATTGAAGAGGGTGGGGGAAGCATGGGTGAAGAACTTGCTGGACATAAGG 2095924 Query 214263 CTGTAGGTCTCCAGGAC 214279 | || ||||||| ||| Sbjct 2095925 TTATATGTCTCCACGAC 2095941 >seq61 Length=1579179 Score = 185 bits (204), Expect = 2e-41 Identities = 486/733 (66%), Gaps = 19/733 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| | || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 1456290 CTGGTAGTCAGCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGAGAGATGTTCTC 1456349 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCC-AGCA 47957 ||||||| ||||||||||| | || || ||| | || || || | |||| Sbjct 1456350 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCT-TCTCGTTGCCGAGTGCGACGAGCA 1456408 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || ||||| |||| ||||| | |||||| || ||||||||| | |||| Sbjct 1456409 GACGGTCAGCGACAAACTCAATGTACTGCTTCATGAGATTGGAGTTCATGCCAAGCAGGG 1456468 Query 48018 ACAC-GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| ||| | |||| ||||| ||||||| ||| || ||||| || | | || Sbjct 1456469 -CACAGGGGAGGGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCACAAATGATG 1456527 Query 48077 TGCTTAACGCGGGAC-TCTGAGGGTTTGTT--GCGCAGGTGCTTGGCATAGAGCATGCAG 48133 | || || | |||| | | | || | | | | || | || | |||| Sbjct 1456528 TCCT------GGATCATCTGCTTGCTAGCACGGCCCTTGAGGTGGGAGTGAAGAAGGCAG 1456581 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || ||||| |||| | || || || || ||||||| ||||||||||| ||||| Sbjct 1456582 GCGAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCG 1456641 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||||| || | || ||||||||||| || | || || | ||| ||||||||| Sbjct 1456642 GGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAGATA 1456701 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || || ||||| || || | || | || | || || |||||| |||| Sbjct 1456702 CCCTCGACAGCAGCGAAGGCAACCAGACGCTGGGCAAAGGTAGAGTCCTTGTCCTGGATC 1456761 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373 || || |||||||| |||||||| |||||| || || || || | || |||| Sbjct 1456762 CATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTATCAACAGCGTTGAAG 1456821 Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATC 48430 || | | | || | | || | ||||| | ||||||| | || || Sbjct 1456822 AGGTAGGTTCGCTGGGCGGGCTCTTTGATGTAGGTGTCAATGAGCAG---GGAATAGGTC 1456878 Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490 || ||||| | ||||| || ||| ||||| ||||||||| | |||||| | | Sbjct 1456879 TCCGAGTGAATGTTCTCCATCATGATTTGGAATCCGTAGAAGCATCGAGCCTCAGGGATC 1456938 Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550 || || || | ||||| ||| | |||||||| ||||| || ||||| || ||||| Sbjct 1456939 TGGACCTCGCCGCTGAATCGCTCAACGAGATTCTCGTTGACAATGCCATCGGACGCAGCG 1456998 Query 48551 AAGAAGGCAAGGA 48563 ||||||||||||| Sbjct 1456999 AAGAAGGCAAGGA 1457011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532066417920