Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq4 114 1e-20 >seq4 Length=1130759 Score = 114 bits (126), Expect = 1e-20 Identities = 171/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 139271 ACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGAT 139330 ||| || || | |||||||| ||||||| || || || || || || || |||||||| Sbjct 271606 ACCGTGGTAAACAGCATAGAAAGCAGACATGTTGGCAAGAAGAGCCTGGGCCGTGCAGAT 271665 Query 139331 GTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTA 139390 ||| ||||| || || || | || ||| |||||||| | ||| || || || | | Sbjct 271666 GTTGCTGGTGGCCTTCTCACGTCGAATGTGCTGCTCACGAGTCTGGAGAGCGAGACGCAG 271725 Query 139391 TGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTT 139450 ||||| ||||| | ||| || ||| || | | ||| || ||||| | ||| Sbjct 271726 AGCAGGCTTGCCGAGACGATCCTTGGAAACACCGACGAGACGGCCGGGGATCTTGCGCTT 271785 Query 139451 ATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACC 139510 ||||| || | || || ||||| |||||||||||||| ||||| |||| ||| | ||| Sbjct 271786 GTACTTCTCAGAGGTAGCGAAGAAAGCAGCATGAGGACCACCGTAACCCAGAGGGACACC 271845 Query 139511 AAA 139513 || Sbjct 271846 GAA 271848 Score = 105 bits (116), Expect = 8e-18 Identities = 262/397 (66%), Gaps = 3/397 (1%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| | |||||||| || || || || ||||| || || ||||| ||||| ||||| || Sbjct 270455 ACAGCGATAGGACCAACACCGGGGCCACCACCACCGTGGGGAATGCAGAAAGTCTTGTGG 270514 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || ||||| || ||||| || || ||||| || | ||||| | ||| || Sbjct 270515 AGGTTGAGATGGCAGACATCAGCGCCGATGTCACCGGGGCTGCAGAGACCAATCTGGGCG 270574 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || ||||| || | || || |||| |||| || || |||| | || | | Sbjct 270575 TTCATGTTGGCACCGTCCATGTAGACGAGACCGCCATGCTCGTGGACGAGGTCGCAGACC 270634 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 || |||| | | || || |||||| || || || ||||||| ||| || | | Sbjct 270635 TGCTTGATCTCGGGCTCGAAGACACCAAAGGTGGAAGGGTATGTAACCATGATGCCAGCA 270694 Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA--- 138479 |||||| | | | ||| || || ||||| | || ||| | ||| ||| Sbjct 270695 AGTTCATCGGCGTGCTTGACGCACTTGGCCTTGAGATCCTCGACGTCCAGGTTACCAGTT 270754 Query 138480 TCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTA 138539 | | | |||||||||||| || || ||||| || |||||| | || ||||| || Sbjct 270755 TTAGCGTCACACTTGACAGTGACGACCTTCATACCGGCCATGGCAGCGGAGGCAGGGTTG 270814 Query 138540 GTTCCATGTGCTGACTCTGGTATCAGACATACATTTC 138576 || || || || || | || ||||| || || |||| Sbjct 270815 GTACCGTGAGCAGAAACAGGGATCAGGCAAACCTTTC 270851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997944038760