Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq44 226 3e-54 >seq44 Length=2799272 Score = 226 bits (250), Expect = 3e-54 Identities = 577/869 (66%), Gaps = 27/869 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| || | || |||||| || || || ||||| |||| Sbjct 2095998 CCTCAGCACATGATCATGCGTGTGTCTATTGGCATCTGGGGTGATGATATTGAGCGTGTC 2095939 Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 |||||||||| || |||||| |||| | | ||| || || | || ||||||| Sbjct 2095938 GTGGAGACATATAACCTTATGTCCAGCAAGTTCT--TCACCCATGCTTCCCCCACCCTCT 2095881 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 ||||||||||||| || ||| ||| | ||| |||||| | | | || ||||||| Sbjct 2095880 TCAATGCTGGTACCCCTCAACCCCAGCTTTCCTCATGCTTCTTGGTTGACATGAAGGAGG 2095821 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || || |||||||||||| || || | | ||||| || || ||| ||||| Sbjct 2095820 ACAGCATTGACGGTATCTATGATACCCTCAAGACCTGTGCCATGATTTCCAAGATGGCTG 2095761 Query 75450 GGGGTATTGGG----ATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 75505 | |||||||| |||| || | | ||| ||| | || ||| || Sbjct 2095760 GTGGTATTGGTCTCAATGCCCACCGAATCCGTG----CCACTGGCTCCTACATTGCTGGT 2095705 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || || ||| ||| | ||| || |||| ||||| || || || ||| ||| || ||| Sbjct 2095704 ACCAACGGTACATCCAACGGTGTTGTTCCTATGCTACGTGTCTTCAACAACACTGCCCGC 2095645 Query 75566 TATGTAAATCAAGCGGGGCGTCGCAAGGG-----GTCCATC-GCGGTCTACTTGGAACCA 75619 || || |||| ||| || |||| | || | | || ||||| | || || Sbjct 2095644 TACGTTGATCA---GGGTGGTAACAAGCGACCTGGTGCTTTTGCCATCTACCTAGAGCCT 2095588 Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679 ||||| || ||| || | ||||||||||| | ||| ||||| ||| | || |||| Sbjct 2095587 TGGCACGCTGATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTC 2095528 Query 75680 CGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 || | || || || |||| ||||| || || |||||||||||||| |||||| Sbjct 2095527 CGCGCCCGCGACCTGTTCCTGGCCCTCTGGATCCCTGATCTTTTCATGAAGCGTGTTGAG 2095468 Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799 || || | ||| | ||| | || || || || || ||||| ||||| Sbjct 2095467 AAGAACGGAGAGTGGACCCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACTGCTAC 2095408 Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTA-GAGCCAATGCGAC 75858 ||||| |||||||| ||||||||| ||||| || ||| |||| | | | || | Sbjct 2095407 GGTGAAGAGTTTGAGGCCCTCTACGAGAAGTACGAGAGGGAAGGTAAGGGTC---GCAAG 2095351 Query 75859 TGTACCA-GCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 | | || | | | || | ||||| | || || || | | ||||| ||||| |||| Sbjct 2095350 TCCATCAAGGCTCAGAAGCTTTGGTATGCCATCCTTGAGGCCCAGACCGAGACCGGAAAC 2095291 Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 || | ||||||||||||||||| |||||| ||||| ||||| ||||| | || || Sbjct 2095290 CCCTTCATGCTTTACAAGGATGCCTGTAACCGCAAGAGCAACCAGAAGAACCTCGGTACC 2095231 Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036 ||| ||||| ||||| ||||| || || | |||||| | |||||| ||| Sbjct 2095230 ATCCGAAGCTCTAATCTGTGCACTGAGATCATCGAGTACTGTGCCCCTGATGAGGTCGCT 2095171 Query 76037 GTTTGCAATTTGGCATCAATCGCCCTTCC 76065 |||||||| | || || | ||||| || Sbjct 2095170 GTTTGCAACCTTGCCTCCCTTGCCCTGCC 2095142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569130201440