Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq44 170 6e-37 seq61 136 1e-26 seq2 134 4e-26 seq12 93.3 1e-13 >seq44 Length=2799272 Score = 170 bits (188), Expect = 6e-37 Identities = 583/899 (65%), Gaps = 15/899 (2%) Strand=Plus/Plus Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 |||||| |||||| ||||| || |||||| || | ||||||||||| || | | Sbjct 2095202 ATCTCAGTGCACAGATTAGAGCTTCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGG 2095261 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 ||||| ||||||||||| || ||| | ||| |||| ||||| |||| || || || || Sbjct 2095262 TTACAGGCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCAAGGATG 2095321 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819 ||| || | | || || || |||| | |||||| ||| || ||| Sbjct 2095322 GCATACCAAAGCTTCTGAGCCTTGATGGACTTGCGACCCTTACCTTCCCTCTCGTACTTC 2095381 Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879 || || | | || |||||||| || || || |||||||||| | |||| Sbjct 2095382 TCGTAGAGGGCCTCAAACTCTTCACCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGG 2095441 Query 155880 CAAAACAGCGACCAAATT---TTATTACCGATTACACGCTCCATAAATACATCACTCGCC 155936 || | || | ||| | || || | | |||||| ||| || | |||| | Sbjct 2095442 CACATAAGGGTCCACTCTCCGTTCTTCTCAA---CACGCTTCATGAAAAGATCAGGGATC 2095498 Query 155937 CAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGC 155996 || | || ||| ||||| | || |||||| | ||||| ||||| || || Sbjct 2095499 CAGAGGGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGA 2095558 Query 155997 TCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTC 156056 || | ||| || | ||||| || ||||| || || || |||||| |||| Sbjct 2095559 TCAAGGAACTCGAAGACATCAGCGTGCCAAGGCTCTAGGTAGATGGCAAAAGCACCAGGT 2095618 Query 156057 CTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGA 156113 | |||| ||||||||||| || || || ||||| || |||||||||| |||||||||| Sbjct 2095619 CGCTTGTTACCACCCTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCATAGGA 2095678 Query 156114 ATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTA 156173 | || ||| ||||| || || ||||| || ||| | || |||| | || | Sbjct 2095679 ACAACACCGTTGGATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGATTCGG 2095738 Query 156174 TGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCATTCCTTTACAGT 156232 || || || ||||||||||| | |||| || ||||| || || ||| | || Sbjct 2095739 TGGGCATTGAGACCAATACCACCAG-CCATCTTGGAAATCATGGCACAGGTCTTGAGGGT 2095797 Query 156233 ATTGAAAATACCTTCAATAGAATCATCTTCCAT-TGATAGTAGATAGCACGAACTTAATT 156291 || | ||||| ||||| || || | ||| | | ||| |||| || | | Sbjct 2095798 ATCATAGATACCGTCAATGCTGTCCTCCTTCATGTCAACCAAGA-AGCATGAGGAAAGCT 2095856 Query 156292 GAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAG 156351 | ||| | || || ||||| ||||| || || || | ||||| | || |||| | | Sbjct 2095857 GGGGTTGAGGGGTACCAGCATTGAAGAGGGTGGGGGAAGCATGGGTGAAGAACTTGCTGG 2095916 Query 156352 ACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTA-GACCCGTGAATACAGATAGAG 156410 ||||| | ||||||||| | ||||| || | |||| | || | ||||| Sbjct 2095917 ACATAAGGTTATATGTCTCCACGACACGCTCAATATCATCACCCCAG-ATGCCAATAGAC 2095975 Query 156411 ACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTAT 156470 || | ||| ||| |||||||||||||| |||||| || ||||| || |||||| Sbjct 2095976 ACACGCATGATCATGTGCTGAGGACGCTCGACAATCTTGCCGTCAATCTTGAGGAGGTAT 2096035 Query 156471 GCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAATCAAT 156529 | || |||| || || || || || || | | | |||||||||| ||| |||| Sbjct 2096036 GATCGCTCCAATGTCTTGAAGCCAAAGTATTGGTATTGGAAATCACGGTCGTAGACAAT 2096094 >seq61 Length=1579179 Score = 136 bits (150), Expect = 1e-26 Identities = 230/333 (69%), Gaps = 0/333 (0%) Strand=Plus/Minus Query 133339 GATGGAAAATATCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATAC 133398 |||||| || || || || || ||||| || ||||| || ||||||||||| | Sbjct 1456899 GATGGAGAACATTCACTCGGAGACCTATTCCCTGCTCATTGACACCTACATCAAAGAGCC 1456840 Query 133399 CGTCCAGAAGCACAAACTATTCAACGCCATTAGCGAATTTCCTTGTATTAAAAAGAAATC 133458 || |||| | | || |||||||| || |||| || || |||||| | Sbjct 1456839 CGCCCAGCGAACCTACCTCTTCAACGCTGTTGATACCATTCCCTGCATCCGAAAGAAGGC 1456780 Query 133459 TGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGC 133518 ||||||||| ||| |||||||||||||||| | | ||||| ||||| ||||| Sbjct 1456779 TGACTGGGCCATTCGATGGATCCAGGACAAGGACTCTACCTTTGCCCAGCGTCTGGTTGC 1456720 Query 133519 TTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAA 133578 || |||| || ||||| || || ||||||||||| || ||| || || ||||| || Sbjct 1456719 CTTCGCTGCTGTCGAGGGTATCTTCTTCAGTGGTGCCTTTGCCTCCATCTTCTGGCTCAA 1456660 Query 133579 AAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGC 133638 |||||||| | | || || ||| || || ||||| || || || | || |||| Sbjct 1456659 GAAGCGTGGCCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGG 1456600 Query 133639 ACTTCACACCGAATTTGCCGTTTTACTTCACTC 133671 ||||||||||| || ||| | |||||||| Sbjct 1456599 TCTTCACACCGACTTCGCCTGCCTTCTTCACTC 1456567 >seq2 Length=1465436 Score = 134 bits (148), Expect = 4e-26 Identities = 208/295 (71%), Gaps = 4/295 (1%) Strand=Plus/Plus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||||| | ||||| || || |||||||| ||||| ||| | || || || || Sbjct 1127565 TCTTCCAGAGCCTTGACCAATCGTCGCTGAATGTAACCTGTTTCGGCAGTCTTGACCGCA 1127624 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691 |||||||| ||||| | |||||| |||| || |||||||| | ||| || || Sbjct 1127625 GTATCAATAAGACCTTCTCGACCAGCCATGGCGTGGAAGAAGAACTCGCTAGGGGTAAGG 1127684 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTA 302751 || | || | ||| |||||||||||||||| || ||||| || | ||| |||||| Sbjct 1127685 CCACGAAGGTAAGAGTTCTCAACGAAACCACGAGCTTCGGGTGAGTAATCGTCCTTGGTG 1127744 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 || || |||||||| | || || | ||| | || ||||| || || ||||| | ||| Sbjct 1127745 AAATGAGGCAGGGTGCGGTACTTGAAACCGAAAGGAATACGTTTGCCTTCAACAATTTGC 1127804 Query 302812 TGTCCCAGGCACGA--AATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864 || || | || || | ||||||| |||||||| | | | |||||||| || Sbjct 1127805 TGACC--GACAAGAGCAGTCATCTGTGAAATATTGATAGAAGAACCCTTGGAACC 1127857 Score = 89.7 bits (98), Expect = 2e-12 Identities = 104/140 (74%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| | || ||||| |||||||| |||||||| Sbjct 1126788 AGAATTTCCTTGAGACGCGGCACACCAAGAGTAACGTT---CTTGGACGACACACCAGCG 1126844 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || |||||||| ||||| || | || |||| ||||||||||| || || || | Sbjct 1126845 AAATGGAAAGTGTTCAGTGTCATCTGGGTAGCGGGCTCACCAATGGACTGGGCAGCCAAA 1126904 Query 301933 ATACCAACCATTTCTCCTGG 301952 | |||||||||||| || || Sbjct 1126905 ACACCAACCATTTCACCAGG 1126924 >seq12 Length=4630793 Score = 93.3 bits (102), Expect = 1e-13 Identities = 112/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 ||||| || ||||| ||| ||||||||| || || ||||| || || ||||| |||| Sbjct 3714912 TGGGCAATTGTCATTCGAGAGGGAATAGCGTGAGGGTTGATAATAATATCGGGAGTCAGG 3714853 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957 || || |||| |||||||||| | || ||| || ||||| || |||||||| Sbjct 3714852 CCTTCTCTGCTGAAAGGCATATCCTCCTG-TCGATAGGTGACACCAATGGTACCCTTTTG 3714794 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||||||||| ||||| |||||||| Sbjct 3714793 ACCGTGACGAGAAGCAAACTTGTCACCAAT 3714764 Score = 87.8 bits (96), Expect = 5e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| | | || || ||||| | | ||||||| || | ||| | | || Sbjct 3715344 ATGAGTCCACAAATTTCGCATACGTGGACTCGGAAAGCATCCGACACCTCAAACAAACGC 3715285 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| ||| || || ||||| | ||||||||||||||| ||||| || ||||| Sbjct 3715284 TCCTTCAAGAAAGCAGCAGCGCCGTGAGCAATCATACAATCACGTTCCATCTCTCCGAAT 3715225 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTG 251564 || ||||||||||| ||||| | ||| || ||||||| Sbjct 3715224 CGGAGACCACCATCTCGAGCACGACCTTCCACAGGCTG 3715187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816411967231