Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq12 87.8 7e-12 >seq12 Length=4630793 Score = 87.8 bits (96), Expect = 7e-12 Identities = 117/162 (72%), Gaps = 3/162 (2%) Strand=Plus/Minus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||| || ||||| ||||| ||||| || |||||||||| | ||| || Sbjct 3714922 CTCAATCAAATGGGCAATTGTCATTCGAGAGGGAATAGCGTGAGGGTTGATAATAATATC 3714863 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCAGGTACAATCAAACCAAT 309803 || ||| || | | ||||||||||||| || | | | | |||||| Sbjct 3714862 GGGAGTCAGGCCTTCTCT---GCTGAAAGGCATATCCTCCTGTCGATAGGTGACACCAAT 3714806 Query 309804 AGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 || ||||||||| |||| | |||||||||||||||||||| Sbjct 3714805 GGTACCCTTTTGACCGTGACGAGAAGCAAACTTGTCACCAAT 3714764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951972824390664