Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq2 102 6e-16 >seq2 Length=1465436 Score = 102 bits (112), Expect = 6e-16 Identities = 255/385 (66%), Gaps = 3/385 (1%) Strand=Plus/Minus Query 281424 CGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGA 281483 |||||| || || | ||||| |||||||| | ||| || ||||| ||||| || || | Sbjct 1404468 CGGCAGAGACGTTCATGATACCGTTGGCATCAAGATCGAAGGTGACCTCAATCTGGGGAA 1404409 Query 281484 CCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTT 281543 | || | | ||||| ||||| || | | || | |||| | || || || | Sbjct 1404408 CACCACGAGGGGCAGGGGGGATACCAGTGAGCTCGAACTTGCCCATAAGGTTGTTGTCCT 1404349 Query 281544 TAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAAT 281603 | ||| | || ||||||||| | | |||||| || ||| || || || || Sbjct 1404348 TGGTGCGCTGGCGCTCACCCTCGTAGACCTGGATAAGGACACCAGGCTGGTTGTCGGAGA 1404289 Query 281604 AAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGG 281663 | || | || || ||| || || || || || ||||| | || | |||| Sbjct 1404288 AGGTAGAGAAGACCTCGGACTTCTTGGTGGGGATGGTGGTGTTGCGGGGGATGAGCTTGG 1404229 Query 281664 TCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAA 281723 |||| ||||||||||| || || | ||| ||||| ||||| | |||||| | |||| || Sbjct 1404228 TCATCATACCACCAGCGGTCTCAATACCGAGAGAGAGAGGCGCGACATCGAGAAGGAGAA 1404169 Query 281724 TAT--TTTGAAGTTTTTCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCAC 281780 | | || | || || | | || | |||| || ||||| || || | |||||||| Sbjct 1404168 TCTCGTTGGTAGACTTGCTGGAGGTGTCACCAGACAGGATAGCAGCCTGGACAGCAGCAC 1404109 Query 281781 CATATGCAACAGCTTCATCAGGATT 281805 | || |||||||| ||||| || || Sbjct 1404108 CGTAGGCAACAGCCTCATCGGGGTT 1404084 Score = 98.7 bits (108), Expect = 7e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| ||||||||| | |||| || |||||||| |||||||| ||| | ||||||||| Sbjct 1129114 GGTAAGGAAGGTCGTCTCCGAGGTAACTTGATGGGTAAGCGTGTGGATTTCTCTGCACGT 1129055 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 ||||| ||||| |||| | || || | || ||||||| ||||| |||| || ||| Sbjct 1129054 ACAGTCATTACAGGTGATGCCAACCTTTCACTACATGAAGTCGGTGTGCCTCGCAGTATC 1128995 Query 432408 GC 432409 || Sbjct 1128994 GC 1128993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740627306966238