Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq11 131 2e-25 seq61 129 6e-25 seq55 116 4e-21 seq1 104 2e-17 >seq11 Length=779747 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| |||| || ||| | | | |||||||||||||| || Sbjct 735637 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTACC 735579 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||||||||| || || ||||| |||||||| |||||| ||| Sbjct 735578 AGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTT 735519 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||||| | |||||| || | ||||| || || || || || || Sbjct 735518 GACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGT 735459 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||||||||||||| Sbjct 735458 CTTGACGAAAATCTGCATG 735440 >seq61 Length=1579179 Score = 129 bits (142), Expect = 6e-25 Identities = 348/524 (66%), Gaps = 19/524 (4%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || |||| || ||||| || ||||| || ||||| | | || ||||| | Sbjct 1456290 CTGGTAGTCAGCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGAGAGATGTTCTC 1456349 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | || || || ||| | ||| | |||||||| Sbjct 1456350 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAGTGCGACGAGCAG 1456409 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATG-GACTGCGCGTTCATGCCCAGCAACG 120529 ||||| || |||||||||||||||| |||| || || | ||||||||| |||| | Sbjct 1456410 ACGGTCAGCGACAAACTCAATGTACTGCTTCATGAGATTG-GAGTTCATGCCAAGCAGGG 1456468 Query 120530 CCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589 | || | ||| |||| ||||||| ||||||| || || || | ||| Sbjct 1456469 CACAGGGGAGGGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCACAAATGATGT 1456528 Query 120590 C---GAGCAT---AGTG-TGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGG 120642 | || ||| || | || ||| |||| | || | || | || ||| Sbjct 1456529 CCTGGATCATCTGCTTGCTAGCACGGC-CCTTG----AGGTGGGAGT---GAAG--AAGG 1456578 Query 120643 CACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGG 120702 || || ||||| ||||| || ||||| || || || || ||||||||| || ||||| Sbjct 1456579 CAGGCGAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 1456638 Query 120703 CCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAAC 120762 |||||||||| ||| | |||||| |||| |||| ||||||| || ||||| Sbjct 1456639 CCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAG 1456698 Query 120763 ACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCG 120822 | ||||| || || ||||| |||| |||| ||| || || | |||| | | Sbjct 1456699 ATACCCTCGACAGCAGCGAAGGCAACCAGACGCTGGGCAAAGGTAGAGTCCTTGTCCTGG 1456758 Query 120823 ATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866 ||||| |||||||| || ||||| || || | ||| || || Sbjct 1456759 ATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAAT 1456802 >seq55 Length=1684425 Score = 116 bits (128), Expect = 4e-21 Identities = 151/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| ||||| || |||||||| | ||| | | | || || |||| Sbjct 937715 ATGGAGGGTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCA-TCTTCAAGCT 937773 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| |||| | |||||||| || ||||||||||| |||||||| |||| Sbjct 937774 GCTTGCCAGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCT 937833 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | || | ||||||| | ||| || || | ||||| ||| ||||||| Sbjct 937834 TGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCTAGGGTGATGGTCTTGCCGG 937893 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 ||| || || ||||| || |||||| Sbjct 937894 TCAAGGTCTTGACGAAGATTTGCATG 937919 Score = 109 bits (120), Expect = 5e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||| |||| || ||| ||| |||||| |||||||| | Sbjct 936983 GGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGACC-GTCCTCCAGCTGCTTAC 937041 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| || || || || |||||||| ||||| || Sbjct 937042 CAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCTTGAATCTTGCTCT 937101 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||| | | || || |||| ||||| || || || || |||| Sbjct 937102 TCACGTTATCAATAGTGTCACTTGATTCGACCTCGAGGGTGATAGTCTTTCCAGTGAGAG 937161 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || ||||||||||| Sbjct 937162 TCTTGACAAAAATCTGCAT 937180 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| ||| | | || | | | ||||| |||| Sbjct 937433 ATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGGCCA-TCCTCAAGCT 937491 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || | ||||||||||| ||||| || || |||||||| ||||| Sbjct 937492 GCTTGCCAGCAAAGATCAAGCGCTGCTGGTCAGGAGGAATTCCCTCCTTGTCCTGGATCT 937551 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | || | || |||| || ||| || || | |||| ||| ||||| | Sbjct 937552 TCGACTTGACGTTGTCGATGGTATCGGAGGACTCAACCTCAAGAGTGATGGTCTTGCCAG 937611 Query 133636 TCAGAGTTTTTACGA 133650 | || || || |||| Sbjct 937612 TGAGGGTCTTGACGA 937626 >seq1 Length=5443851 Score = 104 bits (114), Expect = 2e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 |||||||||||||| || ||| | || || ||||| ||||| || || ||||| |||||| Sbjct 4488597 TCCTCGAGCTGCTTACCAGCGAAGATCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTG 4488538 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||| | || ||| || |||| ||||| | Sbjct 4488537 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATG 4488478 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652 || ||||| ||||| || || |||||| Sbjct 4488477 GTCTTGCCCGTCAGGGTCTTGACGAAA 4488451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420419306120