Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq11 120 3e-22 seq55 113 4e-20 seq1 93.3 4e-14 >seq11 Length=779747 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| || ||| || | || || ||||||||||| ||||| Sbjct 735632 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAA 735573 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| |||| || |||||||||| |||||| ||| | || Sbjct 735572 GATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 735514 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || |||||||| | |||||||| || ||||| | || || | Sbjct 735513 TGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 735454 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 735453 CGAAAATCTGCAT 735441 >seq55 Length=1684425 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| ||| || || |||| |||||||||||||| || || Sbjct 936989 CTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGACCGTCCTCCAGCTGCTTACCAGCGAA 937048 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | ||||||||| ||||| ||||| | Sbjct 937049 GATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCTTGAATCTTGCTCTTCACGTT 937108 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || ||||| ||||| | ||||| || || || || | ||| || || Sbjct 937109 ATCAATAGTGTCACTTGATTCGACCTCGAGGGTGATAGTCTTTCCAGTGAGAGTCTTGAC 937168 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 937169 AAAAATCTGCAT 937180 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||| | | ||| || | || || |||||||| || || || Sbjct 937727 CTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCGAA 937786 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| |||||||| || | ||| | || |||||||||| ||||| ||| | | | Sbjct 937787 AATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACATT 937846 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||| | ||||| || || || ||||| || || || Sbjct 937847 GTCGATAGTGTCGGAAGACTCAACCTCTAGGGTGATGGTCTTGCCGGTCAAGGTCTTGAC 937906 Query 35725 AAATATCTGCAT 35736 || || ||||| Sbjct 937907 GAAGATTTGCAT 937918 Score = 100 bits (110), Expect = 3e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | |||||| | || || |||||||| || ||||| Sbjct 937445 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAA 937504 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 ||||| ||||||||||| | ||||| | |||||||||| |||||| Sbjct 937505 GATCAAGCGCTGCTGGTCAGGAGGAATTCCCTCCTTGTCCTGGATCTT 937552 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | | ||| || |||| ||||| ||||| || || || Sbjct 937217 CTCCTTCTGAATGTTGTAGTCAGAAAGGGTACGTCCGTCCTCCAGTTGCTTGCCGGCGAA 937276 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||| ||||| | ||||| | |||||| ||| |||||| ||||| | | Sbjct 937277 GATAAGTCGCTGTTGGTCAGGAGGAATACCCTCCTTATCCTGGATCTTACTCTTCACATT 937336 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || || ||||| | || || || || || || || || || || Sbjct 937337 GTCGATGGTGTCAGATGACTCAACCTCGAGGGTTATGGTCTTGCCGGTTAAGGTCTTGAC 937396 Query 35725 AAATATCTGCAT 35736 || || ||||| Sbjct 937397 GAAGATTTGCAT 937408 >seq1 Length=5443851 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| |||| | ||||| | || || ||||||||||| || || | Sbjct 4488632 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 4488573 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| ||||| ||||||| |||| || |||||||||| |||||| ||| | | | Sbjct 4488572 TCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 4488513 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726 | | ||||| || || ||||| | ||||| || || ||||||| || || || | Sbjct 4488512 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 4488453 Query 35727 A 35727 | Sbjct 4488452 A 4488452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793245000040