Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq55 131 2e-25 seq11 118 1e-21 >seq55 Length=1684425 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || || || || ||||| ||||||||||| || Sbjct 937692 CCACCACGGAGGCGGAGGACGAGATGGAGGGTAGACTCCTTCTGAATGTTGTAATCAGAG 937751 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| || |||||||| ||||||||||| || || Sbjct 937752 AGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCGAAAATCAATCGCTGCTGATCAGGAGGG 937811 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| || ||||| ||| | |||||||| || || || Sbjct 937812 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACC 937871 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || ||||| || || || ||||| |||||||| Sbjct 937872 TCTAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 937918 Score = 102 bits (112), Expect = 8e-17 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || || ||||| ||||| || |||||||||||| | | ||| | || || Sbjct 937428 ACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGGCCATCCTCA 937487 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| ||||| ||||| |||||||| || || || || || || || || || Sbjct 937488 AGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGGTCAGGAGGAATTCCCTCCTTGTCCTGG 937547 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | || ||||| || || || || ||||| ||||| || Sbjct 937548 ATCTTCGACTTGACGTTGTCGATGGTATCGGAGGACTCAACCTCAAGAGTGATGGTCTTG 937607 Query 134685 CCGGTTAAAGTTTTAACGA 134703 || || | || || |||| Sbjct 937608 CCAGTGAGGGTCTTGACGA 937626 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 ||||| | || ||||| || || || ||||| || ||||||||||||| | ||| || Sbjct 936963 AGTCGGAGAACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGA 937022 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || ||||| || || || || || | ||||||||| || || || || || || Sbjct 937023 CCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCC 937082 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || |||||||| || || || || | ||||| ||||| || ||||| || Sbjct 937083 TTGTCTTGAATCTTGCTCTTCACGTTATCAATAGTGTCACTTGATTCGACCTCGAGGGTG 937142 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | ||| || || ||||| ||||| Sbjct 937143 ATAGTCTTTCCAGTGAGAGTCTTGACAAAAATCTGCAT 937180 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || || ||||| |||||||||||||| || ||| | ||| || || || Sbjct 937205 GTGCAGAGTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTACGTCCGTCCTCCAGTTG 937264 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| || || || | ||||| || || || || || || || || || || || || Sbjct 937265 CTTGCCGGCGAAGATAAGTCGCTGTTGGTCAGGAGGAATACCCTCCTTATCCTGGATCTT 937324 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 || || ||| | ||||| || || || || ||||| || ||||| || ||||| Sbjct 937325 ACTCTTCACATTGTCGATGGTGTCAGATGACTCAACCTCGAGGGTTATGGTCTTGCCGGT 937384 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 ||| || || ||||| |||||||| Sbjct 937385 TAAGGTCTTGACGAAGATTTGCAT 937408 >seq11 Length=779747 Score = 118 bits (130), Expect = 1e-21 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 134481 GCCTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAG 134540 ||| | || || | ||| || | || ||||| || ||||| ||||| || ||||||||| Sbjct 735673 GCCATACCACCACGGAGGCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAG 735614 Query 134541 TCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCG 134600 |||| | |||| | || |||||||| || || ||||| || | |||||||| || Sbjct 735613 TCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCC 735554 Query 134601 GGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGAT 134660 || || ||||| || || || || || || ||||| ||| | |||||||| || Sbjct 735553 GGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGAC 735494 Query 134661 TCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || || || || || | || || |||||||| ||||| Sbjct 735493 TCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 735441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398001998760