Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31]
63 sequences; 42,866,936 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq55 131 2e-25
seq11 118 1e-21
>seq55
Length=1684425
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||||| || || || || ||||| ||||||||||| ||
Sbjct 937692 CCACCACGGAGGCGGAGGACGAGATGGAGGGTAGACTCCTTCTGAATGTTGTAATCAGAG 937751
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| || |||||||| ||||||||||| || ||
Sbjct 937752 AGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCGAAAATCAATCGCTGCTGATCAGGAGGG 937811
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || ||||| || ||||| ||| | |||||||| || || ||
Sbjct 937812 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACC 937871
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || ||||| || || || ||||| ||||||||
Sbjct 937872 TCTAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 937918
Score = 102 bits (112), Expect = 8e-17
Identities = 142/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
||||| || || ||||| ||||| || |||||||||||| | | ||| | || ||
Sbjct 937428 ACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGGCCATCCTCA 937487
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| ||||| ||||| |||||||| || || || || || || || || ||
Sbjct 937488 AGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGGTCAGGAGGAATTCCCTCCTTGTCCTGG 937547
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | || ||||| || || || || ||||| ||||| ||
Sbjct 937548 ATCTTCGACTTGACGTTGTCGATGGTATCGGAGGACTCAACCTCAAGAGTGATGGTCTTG 937607
Query 134685 CCGGTTAAAGTTTTAACGA 134703
|| || | || || ||||
Sbjct 937608 CCAGTGAGGGTCTTGACGA 937626
Score = 100 bits (110), Expect = 3e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
||||| | || ||||| || || || ||||| || ||||||||||||| | ||| ||
Sbjct 936963 AGTCGGAGAACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGA 937022
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| || ||||| || || || || || | ||||||||| || || || || || ||
Sbjct 937023 CCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCC 937082
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| |||||||| || || || || | ||||| ||||| || ||||| ||
Sbjct 937083 TTGTCTTGAATCTTGCTCTTCACGTTATCAATAGTGTCACTTGATTCGACCTCGAGGGTG 937142
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || | ||| || || ||||| |||||
Sbjct 937143 ATAGTCTTTCCAGTGAGAGTCTTGACAAAAATCTGCAT 937180
Score = 98.7 bits (108), Expect = 1e-15
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || || || ||||| |||||||||||||| || ||| | ||| || || ||
Sbjct 937205 GTGCAGAGTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTACGTCCGTCCTCCAGTTG 937264
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||||| || || || | ||||| || || || || || || || || || || || ||
Sbjct 937265 CTTGCCGGCGAAGATAAGTCGCTGTTGGTCAGGAGGAATACCCTCCTTATCCTGGATCTT 937324
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
|| || ||| | ||||| || || || || ||||| || ||||| || |||||
Sbjct 937325 ACTCTTCACATTGTCGATGGTGTCAGATGACTCAACCTCGAGGGTTATGGTCTTGCCGGT 937384
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
||| || || ||||| ||||||||
Sbjct 937385 TAAGGTCTTGACGAAGATTTGCAT 937408
>seq11
Length=779747
Score = 118 bits (130), Expect = 1e-21
Identities = 166/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 134481 GCCTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAG 134540
||| | || || | ||| || | || ||||| || ||||| ||||| || |||||||||
Sbjct 735673 GCCATACCACCACGGAGGCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAG 735614
Query 134541 TCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCG 134600
|||| | |||| | || |||||||| || || ||||| || | |||||||| ||
Sbjct 735613 TCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCC 735554
Query 134601 GGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGAT 134660
|| || ||||| || || || || || || ||||| ||| | |||||||| ||
Sbjct 735553 GGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGAC 735494
Query 134661 TCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || || || || || || | || || |||||||| |||||
Sbjct 735493 TCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 735441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398001998760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |