Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq61 105 9e-18 >seq61 Length=1579179 Score = 105 bits (116), Expect = 9e-18 Identities = 361/559 (65%), Gaps = 8/559 (1%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||||||||| || || |||||||| | | || | ||||| || || || || Sbjct 1456578 GCAGGCGAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAG 1456637 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| || |||||||| |||||||| || |||| ||||| | ||| ||||| Sbjct 1456638 ACCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAA 1456697 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATT---ATG 39792 ||| || || || || || || ||||| || | || | | | | || || || Sbjct 1456698 GATACCCTCGACAGCAGCGAAGGCAACCAGACGCTGGGCAAAGGTAGAGTCCTTGTCCTG 1456757 Query 39793 TATCCA-CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCAT 39851 ||||| | || ||||| ||||| ||||| | || || || || || | ||| | Sbjct 1456758 GATCCATCGAATG-GCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTATCAACAGCGT 1456816 Query 39852 TAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911 | ||||| || | | | ||||| | || || || || | ||| ||| Sbjct 1456817 TGAAGAGGTAGGTTCGCTGGGCGGGCTCTTTGATGTAGGTGTCAATGAGCAGGGAATAGG 1456876 Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 | || || || ||||| || ||| || || |||||||| || |||| || |||| | Sbjct 1456877 TCTCCGAGTGAATGTTCTCCATCATGATTTGGAATCCGTAGAAGCATCGAGCCTCAGGGA 1456936 Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031 | || ||||| | |||| || | | ||| || || || || ||||| || | Sbjct 1456937 TCTGGACCTCGCCGCTGAATCGCTCAACGAGATTCTCGTTGACAATGCCATCGGACGCAG 1456996 Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCA---ATTTATTCC 40088 | || || || | | || || || | | ||||| | |||| || |||| Sbjct 1456997 CGAAGAAGGCAAGGATGTGAGAGATGAAGAACTGCTCATCAGTGGTCAGACGGTTGTTCC 1457056 Query 40089 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148 |||| | || || || || | ||| | || || || ||||| || || ||||| |||| Sbjct 1457057 AGTCGTGGAGGTCCTTGGAGAGATCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCGGCCT 1457116 Query 40149 TTTTGTACATGTTCCATAT 40167 | |||||||| | ||| || Sbjct 1457117 TCTTGTACATTTGCCAGAT 1457135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908259059320