Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq61 141 3e-28 >seq61 Length=1579179 Score = 141 bits (156), Expect = 3e-28 Identities = 353/526 (67%), Gaps = 15/526 (3%) Strand=Plus/Minus Query 443349 GAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTATCTAGCCATGAA 443408 |||||||||||||||||||||||| | ||| |||||| | || || | | |||| Sbjct 1457090 GAGGAGATTGATCTCTCCAAGGACCTCCACGACTGGAACAACCGTCTGACCACTGATGAG 1457031 Query 443409 CGCGATTTCTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGACGGTATCGTCGGT 443465 | | ||||||| | |||| | |||||||| || || ||| || || ||| Sbjct 1457030 C---AGTTCTTCATCTCTCACATCCTTGCCTTCTTCGCTGCGTCCGATGGCATTGTCAAC 1456974 Query 443466 GAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCCCGCTACTTCTAC 443525 |||||||| || ||| ||| || ||| | | | ||||| || | ||||||| Sbjct 1456973 GAGAATCTCGTTGAGCGATTCAGCGGCGAGGTCCAGATCCCTGAGGCTCGATGCTTCTAC 1456914 Query 443526 GCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAGTTGATCAAGACA 443585 | |||||| | ||||||||||||||| | ||| ||| | | | || | || Sbjct 1456913 GGATTCCAAATCATGATGGAGAACATTCACTCGGAGACCTATTCCCTGCTCATTGACAC- 1456855 Query 443586 CTAATTCCGAACGAAGACGAACAGCGGTCCATCTTCT-CATCGTTCATGA--CCACGCCA 443642 ||| || || || || ||||| || | ||| || || | ||| ||| || Sbjct 1456854 CTACATC--AAAGAGCCCGCCCAGCGAACCTACCTCTTCAACGCTGTTGATACCATTCCC 1456797 Query 443643 GGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAGAAAATCTC-AGCTT 443701 ||||| | ||| || |||||| | | ||| || | || || ||| | ||| Sbjct 1456796 TGCATCCGAAAGAAGGCTGACTGGGCCATTCGATGGATCCAG-GACAAGGACTCTACCTT 1456738 Query 443702 CGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAG 443761 | | |||| || || || || |||| ||||| || | || || || || |||| | Sbjct 1456737 TGCCCAGCGTCTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCAGTGGTGCCTTT-G 1456679 Query 443762 CCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAAC 443821 |||||||||||||| | || |||||||| || |||| |||||||||||| ||||| | Sbjct 1456678 CCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGTCTGACCTTCTCCAACGAGC 1456619 Query 443822 TGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 | ||| ||| || |||||| | || |||||||||||| ||||| Sbjct 1456618 TCATCTCTCGTGATGAGGGTCTTCACACCGACTTCGCCTGCCTTCT 1456573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588334717915035