Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq44 381 6e-101 seq61 96.9 4e-15 >seq44 Length=2799272 Score = 381 bits (422), Expect = 6e-101 Identities = 1150/1750 (66%), Gaps = 57/1750 (3%) Strand=Plus/Plus Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247 |||| || | ||||||||||| ||||||||||| |||||| || | |||||| | Sbjct 2094270 GTGTGCGAAGGTAGTACATGCCAGTCTTGAGACCAAGCTTCCAGCCAGCGAAGTGCATGC 2094329 Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307 | | | |||| ||| | || | || |||| |||||||| || |||||||| |||| Sbjct 2094330 TGGTGATCTTGCCCATCGTGGGATCCTTCATGTGAATGTTGAGGGATTGGGACTGATCGA 2094389 Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367 || | ||||| |||||||| ||||| | || ||| || | ||||||||| | | Sbjct 2094390 TGAATGCACCTCGGTCGGCAGCCATCTGGACAACCTGGCGCTGAGAAATCTCCCAAACAG 2094449 Query 78368 TCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTACGC--TCCCACCGGC 78425 || ||||| ||||| | || | |||| | | | ||| | | |||| Sbjct 2094450 TCTTGTAAAGAGCCTTGACGTCGGCAGGGATATT--GGGGATGTTCTGAATAGAACCGTT 2094507 Query 78426 -TCGCACA--ATTTCATTCTTAATT---TGAGGGTTCCAGCGATTGATCTTCTGAAGATC 78479 ||| | | || ||||| || | || | ||| || || | |||||| Sbjct 2094508 ATCGGAAATAATACGGTTCTTCATGGCATCAGACCACAAGCCCATG-TCGAC--AAGATC 2094564 Query 78480 CCGGA----CCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGT 78535 || ||||| |||| | | |||||| || || ||| |||||| ||| Sbjct 2094565 TTTGAGCAACCAGG----GGTTGACAACCTGGAACTCACCAGCAAGGACTCGGCGCTGGT 2094620 Query 78536 AGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGG 78595 | ||||||| ||||| |||||||| ||||||||| |||| ||||| | || || Sbjct 2094621 AAATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTACCCAGAATCTGCGAAGTACTGG 2094680 Query 78596 CGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGA-----TCTC 78650 | || ||||| || |||| || ||| || || | ||| || ||||| | |||| Sbjct 2094681 CAGTAGGCATAGGGGCGAGGAGCAGACTGTTACGGATACCGTGAGTCTTAACATCCTCTC 2094740 Query 78651 GACCTTTAGGCC-GTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGA 78709 || | || |||||||| || | | || ||||||||| || || | Sbjct 2094741 GAAGACTCTCCCAGTCCCAAAGGTCGGAAGGCTTGACGTTCCACATGTCGAACTGGAGAA 2094800 Query 78710 TACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTT 78769 ||||||| || || || || |||||||| || ||| | |||||||||||||| | | Sbjct 2094801 TACCCTCAGAGGCGGGAGAACCCTTGAAGGTAGAGTAGGGACCCTCCTCCTTGGCCAACT 2094860 Query 78770 CGCATGACTCGAGC-AGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCG 78828 ||| | || ||||| |||||||| | | ||| ||||| |||||||||||| Sbjct 2094861 -GCACGGAGGCAGTGAGGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCT 2094919 Query 78829 CGCGCCTTGGTCTCGTCGAACGAAAGGCC--GAGCATCATGAAGACATCGGCCAGGCCCT 78886 | |||| || || || | | || ||||| | ||| |||| || || |||| Sbjct 2094920 CTAGCCTCGGGAGACTCAAAGGGCATGCGCAGAGCA--AGGAAAGCATCAGCAAGACCCT 2094977 Query 78887 GGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGT 78946 |||| || | | |||| |||||||| ||||||||||| || || ||| | | |||| Sbjct 2094978 GGACACCAAGACCGATAGGTCGGTGACGCATGTTGCTGTTGCGAGCCTCTTGTACAGGGT 2095037 Query 78947 AAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACA 79006 | || |||||||| ||||| ||| || ||| ||| || | |||| | || Sbjct 2095038 AGTGATTGACATCGATGATCTTGTTCAAGTTGCGGACGACAACCTGACTGACCTGATGCA 2095097 Query 79007 ATTTGGCGAAATCAAA--ATGATT--TCCT--TTGATGAAAGTCGGTAGGCACAGCGATG 79060 || ||| ||| | | | | || | |||||||||| || ||| || || | Sbjct 2095098 GCTTCTTGAAGTCATAGCAAGCCTCATCGTAGTTGATGAAAGCAGGCAGGGCAAGGGAGG 2095157 Query 79061 CCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAAT 79120 | |||||||| || || ||| || ||| | | ||||||||| || ||||||| || Sbjct 2095158 CAAGGTTGCAAACAGCGACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCACAGAT 2095217 Query 79121 TAGACGACTT--GATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTT 79178 |||| ||| |||||| |||| |||||||||||||||||| ||||||||| ||||| Sbjct 2095218 TAGAG--CTTCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTACAGGCATCCTT 2095275 Query 79179 GTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTC 79238 ||| |||| | || | |||||||| ||| || || | | | | ||| | | Sbjct 2095276 GTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCAAGGATGGCATACCAAAGCTT 2095335 Query 79239 CCGGGCCCGGACAACCTT----CTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACT 79294 | | ||| || ||| | |||| |||| | ||||| || ||| | Sbjct 2095336 CTGAGCCTTGATGGACTTGCGACCCTTACCTTCCCTCT----CGTACTTCTCGTAGAGGG 2095391 Query 79295 CGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGT 79354 | | || | || || ||| |||| || || |||||||||| |||||||| ||| Sbjct 2095392 CCTCAAACTCTTCACCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGGCACATAAGGG 2095451 Query 79355 GCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGA 79414 ||| || ||| ||||||||| || |||||| || || |||||||| |||||| || Sbjct 2095452 TCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGATCAGGGATCCAGAGGGCCAGGA 2095511 Query 79415 AGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCA 79474 | ||||||||| || | |||||| | || |||||| || || || || || || | Sbjct 2095512 ACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGA 2095571 Query 79475 TGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGC 79534 || || |||||||| ||||| || |||||||| || | ||| |||||| || | Sbjct 2095572 AGACATCAGCGTGCCAAGGCTCTAGGTAGATGGCAAAAGCACCAGGTCGCTTGTTACCAC 2095631 Query 79535 CCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGG 79594 |||| | ||||| ||||| ||||||||||| || || ||||| || || | |||| || Sbjct 2095632 CCTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCATAGGAACAACACCGTTGG 2095691 Query 79595 CGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAAT--GTTCGAGCAGTGGAT 79652 ||||| || || || | || | || || || | | | ||| | || Sbjct 2095692 ATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGATTCGGT-GGGCA-TTGAG 2095749 Query 79653 TCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCC 79712 || || || || | | |||||| || || || |||||| || || ||||| || Sbjct 2095750 ACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTATCATAGATACC 2095809 Query 79713 CTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTG-TTCG 79771 || || ||| |||||||| | |||| |||||| || | ||| |||||| | Sbjct 2095810 GTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAGGAAAGCTG-GGGTTGAGGGG 2095868 Query 79772 TACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGT 79831 |||| || ||||||||||| || | || || ||||||||||| | ||| || | | Sbjct 2095869 TACCAGCATTGAAGAGGGTGGGGGAAGCATGGGTGAAGAACTTGCTGGACATAAGGTTAT 2095928 Query 79832 ACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGA 79891 | |||||| ||| ||| | || || || |||||| | | || ||||||| | Sbjct 2095929 ATGTCTCCACGACACGCTCAATATCATCACCCCAGATGCCAATAGACACACGCATGATCA 2095988 Query 79892 GGTACTgggg 79901 || ||| || Sbjct 2095989 TGTGCTGAGG 2095998 Score = 360 bits (398), Expect = 2e-94 Identities = 943/1419 (66%), Gaps = 36/1419 (3%) Strand=Plus/Minus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 |||||| || | ||||||| || | | |||||| || || || | ||| ||| Sbjct 2095998 CCTCAGCACATGATCATGCGTGTGTCTATTGGCATCTGGGGTGATGATATTGAGCGTGTC 2095939 Query 19163 CGCGAGACATACGACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTT 19221 |||||||| |||| ||| |||| ||||||||||| || || | || ||||| || Sbjct 2095938 GTGGAGACATATAACCTTATGT-CCAGCAAGTTCTTCACCCATGCTTCCCCCACCCTCTT 2095880 Query 19222 CAACGCCGGTACGAA-CAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATG 19280 ||| || ||||| |||||| ||| | || || ||| | || | |||||||| | Sbjct 2095879 CAATGCTGGTACCCCTCAACCC-CAGCTTTCCTCATGCTTCTTGGTTGACATGAAGGAGG 2095821 Query 19281 ACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCG 19340 |||||||||| || ||||| || || |||||| || || || |||||| | | | Sbjct 2095820 ACAGCATTGACGGTATCTATGATACCCTCAAGACCTGTGCCATGATTTCCAAGATGGCTG 2095761 Query 19341 GGGGTATCGGGATCCACTGCTC---GAATATCCGGTCGAGTGGTACACGAATCAATGGGA 19397 | ||||| || || | ||| | |||| ||| | | ||| | || ||| | Sbjct 2095760 GTGGTATTGGTCTCAA-TGCCCACCGAAT--CCGTGCCACTGGCTCCTACATTGCTGGTA 2095704 Query 19398 CGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGT 19457 | ||||| | || ||||| | || || ||||| || |||||||||||||| ||| | | Sbjct 2095703 CCAACGGTACATCCAACGGTGTTGTTCCTATGCTACGTGTCTTCAACAACACTGCCCGCT 2095644 Query 19458 ACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGC 19517 |||| | ||||| || ||| || || | || ||||||||||| ||||| |||| Sbjct 2095643 ACGTTGATCAGGGTGGTAACAAGCGACCTGGTGCTTTTGCCATCTACCTAGAGCCTTGGC 2095584 Query 19518 ACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCT 19577 |||| || ||| | || ||||| || || || |||||| ||| | |||||| | ||| Sbjct 2095583 ACGCTGATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGCG 2095524 Query 19578 GTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGG 19637 |||||||| ||| |||| | ||||| || || || |||||| || ||||||||| Sbjct 2095523 CCCGCGACCTGTTCCTGGCCCTCTGGATCCCTGATCTTTTCATGAAGCGTGTTGAGAAGA 2095464 Query 19638 ACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCG 19697 ||| ||| ||| ||| |||||||| |||| |||||||| || ||||| |||||| | Sbjct 2095463 ACGGAGAGTGGACCCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACTGCTACGGTG 2095404 Query 19698 AGGCGTTCAATGAGTTGTACCGGACTTACG-TAGCCCAGGGCCGGTTCAAGAAGGTGGTC 19756 | | ||| | | | ||| || |||| || ||| || || ||| || Sbjct 2095403 AAGAGTTTGAGGCCCTCTACGAGAAGTACGAGAGGGAAGGTAAGGGTC-GCAAGTCCATC 2095345 Query 19757 CGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTAC 19816 ||| | | | | ||| | | |||| | |||| ||||||||| | || | | Sbjct 2095344 AAGGCTCAGAAGCTTTGGTATGCCATCCTTGAGGCCCAGACCGAGACCGGAAACCCCTTC 2095285 Query 19817 ATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATC--A 19874 ||| |||||||| ||| ||| |||| || ||||||||| |||| | ||| | Sbjct 2095284 ATGCTTTACAAGGATGCCTGTAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCCGA 2095225 Query 19875 AGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGT 19934 || || || ||||| ||||| ||||| ||| | || || ||| || || | Sbjct 2095224 AG--CTCTAATCTGTGCACTGAGATCATCGAGTACTGTGCCCCTGATGAGGTCGCTGTTT 2095167 Query 19935 GTAATCTGGCGTCCCTGTGCCTGCCGACTTTCGTCA------AGGCCTCCTCCTTCGACT 19988 | || || || ||||| |||||| ||||| ||| | | | | || |||| Sbjct 2095166 GCAACCTTGCCTCCCTTGCCCTGCCTGCTTTCATCAACTACGATGAGGCTTGCTATGACT 2095107 Query 19989 TTGCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATC 20048 | || || | |||| | | ||| ||| || || |||| |||||||| Sbjct 2095106 TCAAGAAGCTGCATCAGGTCAGTCAGGTTGTCGTCCGCAACTTGAACAAGATCATCGATG 2095047 Query 20049 GGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGA 20108 || ||||| | | ||| ||||| || ||||| ||||| || |||| Sbjct 2095046 TCAATCACTACCCTGTACAAGAGGCTCGCAACAGCAACATGCGTCACCGACCTATCGGTC 2094987 Query 20109 TCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTC--GGCCTCTCATTCGACGATCC 20166 | || |||||||| || || || | |||| | ||||| || | | || || ||| Sbjct 2094986 TTGGTGTCCAGGGTCTTGCTGATGCTTTCCT--TGCTCTGCGCATGCCCTTTGAGTCTCC 2094929 Query 20167 CAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTC-CTGG 20225 | |||| | |||||||||||| ||||| ||| || | |||||||| |||||| ||| Sbjct 2094928 CGAGGCTAGAGAGCTCAACAAGCAGATCTTTGAGACCATCTACCACGCTGCCCTCACTGC 2094869 Query 20226 AATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGT 20285 ||||| | | ||||| ||||| || || ||| || |||||||| || ||||| | Sbjct 2094868 CTCCGTGC-AGTTGGCCAAGGAGGAGGGTCCCTACTCTACCTTCAAGGGTTCTCCCGCCT 2094810 Query 20286 CCGAGGGTATCCTCCAGCCGGACATGTGGGGCGTCA------CTGA-GAATGAGTTTTGG 20338 | |||||||| |||||| ||||||||| ||||| | || || | | || Sbjct 2094809 CTGAGGGTATTCTCCAGTTCGACATGTGGAACGTCAAGCCTTCCGACCTTTGGGACTGGG 2094750 Query 20339 AGCGCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCC 20398 || | | || | | || | ||||| ||||| | || ||| ||||| |||| || Sbjct 2094749 AGAGTCTTCGA-GAGGATGTTAAGACTCACGGTATCCGTAACAGTCTGCTCCTCGCCCCT 2094691 Query 20399 ATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACG 20458 ||||| || ||| || | ||||| |||| ||||||||| |||||||| ||||| Sbjct 2094690 ATGCCTACTGCCAGTACTTCGCAGATTCTGGGTAACAACGAGTGCTTCGAGCCTTACACC 2094631 Query 20459 ACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTC 20497 ||||||| ||| ||| || || || ||||||||| Sbjct 2094630 TCCAACATTTACCAGCGCCGAGTCCTTGCTGGTGAGTTC 2094592 >seq61 Length=1579179 Score = 96.9 bits (106), Expect = 4e-15 Identities = 111/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTT 60031 ||||| || ||||| | || || || ||| || || || ||||||||| ||| | || Sbjct 1456739 TTTGCCCAGCGTCTGGTTGCCTTCGC-TGCTGTCGAGGGTATCTTCTTCAGTGGTGCCTT 1456681 Query 60032 CTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGA 60091 | || ||||||||||| ||||||||||||||||| || |||| ||||||||||| Sbjct 1456680 TGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGTCTGACCTTCTCCAACGA 1456621 Query 60092 GCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||| || || || || ||||| || || Sbjct 1456620 GCTCATCTCTCGTGATGAGGGTCTTCA 1456594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524368036720