Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq55 95.1 8e-15 seq11 91.5 9e-14 >seq55 Length=1684425 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || ||||| |||||| |||||||| || || ||||| || || Sbjct 937191 AGACGAAGAACCAAGTGCAGAGTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTACGT 937250 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || ||||| || ||||| || || | ||||||||||| || || | |||||| Sbjct 937251 CCGTCCTCCAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGGTCAGGAGGAATACCCTCC 937310 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || || |||| || | || || | || ||||| ||| || || | ||| Sbjct 937311 TTATCCTGGATC-TTACTCTTCACATTGTCGATGGTGTCAGATGACTCAACCTCGAGGGT 937369 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| || || |||||||| || || || || || ||||| Sbjct 937370 TATGGTCTTGCCGGTTAAGGTCTTGACGAAGATTTGCAT 937408 >seq11 Length=779747 Score = 91.5 bits (100), Expect = 9e-14 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||| ||||||||| |||||| || ||||| || || || || || | || || Sbjct 735649 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 735590 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || ||||| ||||| || | ||||| |||||||| || | ||||||||||| | Sbjct 735589 AGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 735530 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| || | || ||| | ||| ||||| |||||| || | ||| ||||| || Sbjct 735529 ATC-TTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTT 735471 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 || || | || || || |||||||||||| || Sbjct 735470 CCCCGTGAGGGTCTTGACGAAAATCTGCATGATG 735437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729358346679