Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq55 113 3e-20 seq11 95.1 8e-15 >seq55 Length=1684425 Score = 113 bits (124), Expect = 3e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || ||||| ||||| || ||||| ||||| || || || | Sbjct 937180 ATGCAGATTTTTGTCAAGACTCTCACTGGAAAGACTATCACCCTCGAGGTCGAATCAAGT 937121 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||| | | || || ||| ||||| || ||| | || || || || Sbjct 937120 GACACTATTGATAACGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCCCCTGACCAG 937061 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || || || || ||||| |||| |||||||| |||| |||||| Sbjct 937060 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGTCGCACTTTGAGCGACTACAAC 937001 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 937000 ATCCAGAAGGAGTCTAC 936984 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || ||| | || || || || ||||| || || ||||| || | Sbjct 937918 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTAGAGGTTGAGTCTTCC 937859 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || ||| | || | || | || ||||| || || | || || ||||| Sbjct 937858 GACACTATCGACAATGTCAAGTCCAAGA-TTCAGGACAAGGAGGGCATCCCTCCTGATCA 937800 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| || || || || ||||| || || ||||| | ||||| | |||||||| Sbjct 937799 GCAGCGATTGATTTTCGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCTGATTACAA 937740 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 937739 CATTCAGAAGGAGTCTAC 937722 >seq11 Length=779747 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||||||||| || |||||||| || || || || || | Sbjct 735441 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 735500 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| || || | || || || || Sbjct 735501 GACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 735560 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || ||||| || || || || || || | ||||| | |||| |||||| Sbjct 735561 CAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAAC 735620 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 735621 ATCCAGAAGGAGTCCAC 735637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009340472004