Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq23 98.7 8e-16 >seq23 Length=3254394 Score = 98.7 bits (108), Expect = 8e-16 Identities = 201/294 (68%), Gaps = 15/294 (5%) Strand=Plus/Minus Query 29530 GTGAGGGTCGTAGCCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCAC 29589 ||||||||| || |||| | || |||||| ||||| || | |||| | || ||||| Sbjct 1172702 GTGAGGGTCATAACCCTTGACGGTGAAATCTTCTGCTTTCCAACCGTCGATACT-TCCAC 1172644 Query 29590 CCTCCTGTTTATC-------CTC-AGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGA 29641 ||| ||| || ||| || |||||| || ||||| | ||| || || Sbjct 1172643 CCT----TTTCTCGAGAAATCTCTAGCTCTGGAAAGTCTCGTGGCTCGCGCTCCAGTTGG 1172588 Query 29642 ATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAA-A 29700 ||| | || | | |||||||| ||||| || |||||||| |||| |||| || | Sbjct 1172587 ATCTTAAGAGCATTAACGTGGTCGAGGTACACATGAGCATCGCCCATAACGTGGGTAAGA 1172528 Query 29701 CTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGC 29760 || ||| || | || | ||||| || | ||||| || | |||| ||| || || Sbjct 1172527 CT-TCCAGGAACCAGGTCACAAACGTGCGCAAGCATGTGTGTCAATAGAGCGTAACTAGC 1172469 Query 29761 GATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814 ||||| ||||| || ||||| |||||||| | ||||||||||| | ||| || Sbjct 1172468 AATGTTGAAGGGAACACCGAGACCCATGTCGCAAGACCTCTGGTACAACTGACA 1172415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406162888142818