Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20JS626_20[genbank_20GCA_5F000966865.1_202015-03-31] 63 sequences; 42,866,936 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq44 174 2e-38 >seq44 Length=2799272 Score = 174 bits (192), Expect = 2e-38 Identities = 1187/1893 (63%), Gaps = 47/1893 (2%) Strand=Plus/Plus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 |||||||| || |||| || || | | ||| || || |||||||| ||||| || ||| Sbjct 2094242 GTGAACTGGATAGGAGCGGCGGCAGCCTGTGTGCGAAGGTAGTACATGCCAGTCTTGAGA 2094301 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496 || || |||| || ||| |||||||| || | ||| | ||||| || Sbjct 2094302 CCAAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATCGTGGGATCCTTCATG 2094361 Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556 ||||| || | || || ||||||||||| || |||| || || ||||| | | | Sbjct 2094362 TGAATGTTGAGGGATTGGGACTGATCGATGAATGCACCTCGGTCGGCAGCCATCTGGACA 2094421 Query 75557 A--TGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 75614 | ||| |||| ||| ||||||| ||| ||| ||| |||| || | || | Sbjct 2094422 ACCTGG--CGCTGAGAAATCTCCCAAACAGTCTTGTAAAGAGCCTTGACGTCGGCAGGGA 2094479 Query 75615 GATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCAT 75671 ||| | | || ||||| || ||| ||| || ||||| ||||| || ||||| Sbjct 2094480 TATTGGGGATGTTCTGAATAGAACCGTTATCGGAAATAATACGGTTCTTCATGGCATCAG 2094539 Query 75672 TCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTC 75731 |||||| | ||| | | || | || | || || |||| || || || | Sbjct 2094540 ACCACAAGCCCATGTCGACAAGATCTTTGAGCAACCAGGGGTTGACAACCTGGAACTCAC 2094599 Query 75732 CAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTC 75791 ||| | |||| || |||||| || ||| || || || | | || ||||| | Sbjct 2094600 CAGCAAGGACTCGGCGCTGGTAAATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTAC 2094659 Query 75792 CCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGAC 75851 ||| ||| || | ||| ||||| |||||||| || | | | ||| || | || || Sbjct 2094660 CCAGAATCTGCGAAGTACTGGCAGTAGGCATAGGGGCGAGGAGCAGACTGTTACGGATAC 2094719 Query 75852 CATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACAT 75911 | || || | | | ||| ||| | ||| |||||||| || || || || | Sbjct 2094720 CGTGAGTCTTAACATCCTCTCGAAGACTCTCCCAGTCCCAAAGGTCGGAAGGCTTGACGT 2094779 Query 75912 CCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAG 75971 ||| | ||| | || ||||| || | || || || || | || ||| | Sbjct 2094780 TCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAACCCTTGAAGGTAGAGTAGG 2094839 Query 75972 TCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCT-AACGCACCGTAATAAATTGTTTCG 76030 || |||| | || | | ||| | | | | ||| ||| || || || || Sbjct 2094840 GACCCTCCTCCTTGGCCAACT-GCACGGAGGCAGTGAGGGCAGCGTGGTAGATGGTCTCA 2094898 Query 76031 AAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATA 76090 || |||| ||| || || ||| || || || ||||| || | | | || Sbjct 2094899 AAGATCTGCTTGTTGAGCTCTCTAGCCTCGGGAGACTCAAAGGGCATGCGCAGAGCAAGG 2094958 Query 76091 AATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATT 76150 || ||||| || || ||||| || |||| ||| ||||||| || | | | ||| | Sbjct 2094959 AAAGCATCAGCAAGACCCTGGACACCAAGACCGATAGGTCGGTGACGCATGTTGCTGTTG 2095018 Query 76151 TCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACT 76210 ||| ||| | | |||||| | ||| | ||| || || || || | || | ||| || Sbjct 2095019 CGAGCCTCTTGTACAGGGTAGTGATTGACATCGATGATCTTGTTCAAGTTGCGGACGACA 2095078 Query 76211 ACTTTAACCACGTCCTTTAGTTTGAGAAAATCA----AATTTTCCATC-TA--TCACAAA 76263 || | | || | | || || || ||| || | |||| || | | || Sbjct 2095079 ACCTGACTGACCTGATGCAGCTTCTTGAAGTCATAGCAAGCCT-CATCGTAGTTGATGAA 2095137 Query 76264 CATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCA---TA 76320 | || || | || || || || ||||| || ||||||| || |||| || Sbjct 2095138 AGCAGGCAGGGCAAGGGAGGCAAGGTTGCAAACAGCGACCTCAT---CAGGGGCACAGTA 2095194 Query 76321 TTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCT 76380 | || ||||| ||||| |||||| | ||| || || || || | |||||||| Sbjct 2095195 CTCGATGATCTCAGTGCACAGATTAGAGCTTCGGATGGTACCGAGGTTCTTCTGGTTGCT 2095254 Query 76381 CTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTC 76440 ||| |||||| | ||||| ||||| | || || |||| || || |||| | || Sbjct 2095255 CTTGCGGTTACAGGCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTC 2095314 Query 76441 GATAATAGATTTCCAGACGACTCT-AGCTTTTATTATAGATTTGTATCGCTT---CTCTC 76496 | || | | ||| | | ||| ||| | | || || ||| | ||| || | Sbjct 2095315 AAGGATGGCATACCA-AAGCTTCTGAGCCT---TGATGGACTTGCGACCCTTACCTTCCC 2095370 Query 76497 TTTCATA-TTGT-GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGG 76554 | || || || | ||| | || ||||| || || || | || | | |||||| Sbjct 2095371 TCTCGTACTTCTCGTAGAGGGCC--TCAAACTCTTCACCGTAGCAGTCGGCAAGACCAGG 2095428 Query 76555 ACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAG 76614 || || || || ||||| | | |||||| || | | || ||| || ||||| || || Sbjct 2095429 GCACTCGTTGGGGCACATAAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAG 2095488 Query 76615 ATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATT 76674 |||||| ||||| || || | || || || |||| | || || || || || Sbjct 2095489 ATCAGGGATCCAGAGGGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTT 2095548 Query 76675 CTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCAT 76734 |||| ||||| |||||||| | | ||||| ||||| || ||||| || || || | Sbjct 2095549 CTTTCGGAGATCAAGGAACTCGAAGACATCAGCGTGCCAAGGCTCTAGGTAGATGGCAAA 2095608 Query 76735 AACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCT 76794 | |||| ||||| || ||||| |||||||| | || | ||||||||| || | || | Sbjct 2095609 AGCACCAGGTCGCTTGTTACCACCCTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACG 2095668 Query 76795 CAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGC 76854 | ||| |||| || ||||| |||||||| || || |||| ||| || ||| || Sbjct 2095669 TAGCATAGGAACAACACCGTTGGATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGC 2095728 Query 76855 ACGAAT--ATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAG 76912 ||| || | || | || || || || || ||||| || || || | |||||| Sbjct 2095729 ACGGATTCGGTGGGCATTG--AGACCAATACCACCAGCCATCTTGGAAATCATGGCACAG 2095786 Query 76913 CGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAG 76972 || | || |||||||| || || || || || ||| |||||| || | || || Sbjct 2095787 GTCTTGAGGGTATCATAGATACCGTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAT 2095846 Query 76973 CTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAAC 77032 || | || | ||| || || ||||| || | || || || ||||| ||||| Sbjct 2095847 GAGGAAAGCTGGGGTTGAGGGGTACCAGCATTGAAGAGGGTGGGGGAAGCATGGGTGAAG 2095906 Query 77033 CATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC----CCATTGATG 77088 | || || | || || ||||| || | || || ||||| || |||| Sbjct 2095907 AACTTGCTGGACATAAGGTTATATGTCTCCACGACACGCTCAATATCATCACCCCAGATG 2095966 Query 77089 AATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTAT 77148 || | || |||||||| | ||| |||||||| || || ||| |||| | || Sbjct 2095967 ----CCAATAGACACACGCATGATCATGTGCTGAGGACGCTCGACAATCTTGCCGTCAAT 2096022 Query 77149 TTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCT 77208 || | | ||||||| ||||| || || || ||||| || | |||| || || | Sbjct 2096023 CTTGAGGAGGTATGATCGCTCCAATGTCTTGAAGCCAAAGTATTGGTATTGGAAATCACG 2096082 Query 77209 TTCGTAAATAATAACCGAATTTAGTTTGTCCTT 77241 ||||| | ||| | || | ||| | ||||| Sbjct 2096083 GTCGTAGACAATGGCAGAGTCTAGCTCTTCCTT 2096115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933838564160