Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq1076 214 2e-50
>seq1076
Length=4255
Score = 214 bits (236), Expect = 2e-50
Identities = 598/910 (66%), Gaps = 12/910 (1%)
Strand=Plus/Minus
Query 53756 ATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTT 53815
|| || ||||||||||| || | |||||| || | || | ||| || |||||
Sbjct 2047 ATAATTTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTG 1988
Query 53816 TTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATA 53875
||| || |||||||| || || |||||||| | || || ||| |||||| || | |
Sbjct 1987 CGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGA 1928
Query 53876 ATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCT--CTT-TCG 53932
|| || | ||| | ||||||| || | ||| | ||| | ||| |||
Sbjct 1927 ATGGCGTACCAAAGCTTCTGAGCCTTGATGGTC---TTGCGACCCTTGCCCTCCTTCTCG 1871
Query 53933 TATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCA 53992
|| | |||| || ||||| ||||| | | | | | ||||| || ||
Sbjct 1870 TACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCG 1811
Query 53993 TCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGA 54052
| || ||||||| | ||| || |||| | | || |||||||| || ||||||||
Sbjct 1810 TTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGTTTCATGAAAAGATCAGGG 1751
Query 54053 ATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA 54112
|||||||| || | || ||||| | || | ||||| || || |||||
Sbjct 1750 ATCCAAAGGGCAAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGG 1691
Query 54113 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCA 54172
||||| ||||| | | | |||||| ||||| || || | ||| |||| | | | ||
Sbjct 1690 AGATCCAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCG 1631
Query 54173 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 54232
|| || ||||| || ||||| || | || | ||| ||||| || | || | | |||
Sbjct 1630 GGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATA 1571
Query 54233 GGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA 54292
|||| ||||||||| |||| ||| ||||| |||| ||| || ||| | |||||||||
Sbjct 1570 GGAACAATACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATA 1511
Query 54293 T--TACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTA 54350
| | ||| |||||| || || || ||||| || ||||| | || || || |
Sbjct 1510 CGGTGCACATT--TAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGA 1453
Query 54351 ACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACA 54410
||||| ||||| ||||| ||||| || ||| |||| | || | || || || |
Sbjct 1452 GAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGATA 1393
Query 54411 TTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTT 54470
|||| | || ||| || ||||| || | || || ||||| ||||| || | ||
Sbjct 1392 ATTGGGGCTGAGGAGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGC 1333
Query 54471 CAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCC-CATTGATGAATTCCTACT 54529
||| | |||||||| ||||| | || || ||||| || || | || ||
Sbjct 1332 TAGACATCAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGA-TACCAACA 1274
Query 54530 GCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAG 54589
| |||||||| | |||||||||||| | || || ||||| || ||||| || | |
Sbjct 1273 GACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATTTTGAGGAGG 1214
Query 54590 TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATA 54649
|| ||| |||||||| || || ||||| || | |||| || || || || || | |
Sbjct 1213 TATGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACA 1154
Query 54650 ATAACTGAGT 54659
|| | ||||
Sbjct 1153 ATGGCAGAGT 1144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593703780930480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |