Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq886 104 2e-17
seq994 102 7e-17
>seq886
Length=31666
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| || | ||| | |||||||||||| |||||||| || || |
Sbjct 10690 CCACCACGGAGGCGGAGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAG 10749
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || ||||||| ||||| ||||| || |||| | | |||||||| |||
Sbjct 10750 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGG 10809
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| ||||| || || | | ||| ||| || | |||
Sbjct 10810 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACC 10869
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||||||||||||| || || ||||| || || |||||
Sbjct 10870 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 10916
Score = 93.3 bits (102), Expect = 4e-14
Identities = 153/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| || | ||| | ||| || |||||||||||||| ||||| ||
Sbjct 10408 CCACCACGGAGGCGGAGGACGAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGCA 10467
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| || |||| || || || || || ||| | || || | ||||||||| ||
Sbjct 10468 AGGGTTCGGCCGTCTTCAAGTTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGG 10527
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| ||||| || || | | ||| ||||| | |||
Sbjct 10528 ATGCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCGATGGTATCGGACGACTCAACC 10587
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATAT 21169
|| | ||| ||||||||||| || | || ||||| | |||
Sbjct 10588 TCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGACTAT 10628
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| || | ||| || ||||| || ||||| ||||| |
Sbjct 10180 CCACCACGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAA 10239
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| ||| || | ||||| || || ||||| || | || |||| ||| || ||| |||
Sbjct 10240 AGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGGGGA 10299
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| |||||| ||||| | | | ||||| | ||| |
Sbjct 10300 ATACCCTCCTTGTCTTGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACT 10359
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||||||||||| || || | || ||||| || ||||||||
Sbjct 10360 TCCAGAGTAATGGTCTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 10406
>seq994
Length=39861
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| || | |||||||||||| || ||||| ||||| |
Sbjct 17480 CCACCGCGGAGGCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTC 17421
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || | ||||| ||||| ||||| ||| | || || | ||||||||| |||
Sbjct 17420 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCGGGGGGG 17361
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| || || | | ||| || || | ||||
Sbjct 17360 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 17301
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179
|| | ||| || ||||| || || | || ||||| || || ||||| |||
Sbjct 17300 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 17250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422246843772116
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |