Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq179 145 2e-29
seq1076 100 6e-16
>seq179
Length=39909
Score = 145 bits (160), Expect = 2e-29
Identities = 299/443 (67%), Gaps = 15/443 (3%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|||||||||||||| ||||| || |||||||| ||||| || ||||| || || ||||||
Sbjct 35596 GTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGCGCCTTCGCCTCTATCTTCTGG 35537
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
||||||| | ||| | |||||||||| |||| |||||| ||| |||| ||| | |||
Sbjct 35536 CTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGAC 35477
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCT----GTTGA--AAAAGGGTTTTGTTGAT 102091
|| |||||||| |||||||| ||| | || | | |||||| ||
Sbjct 35476 GAGGGTCTTCACACTGACTTTGCCTGCCTCCTCCACTCTCACCTCAAGGGTCGTG----- 35422
Query 102092 ACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAA 102151
||| ||| | | ||| | || || ||||||| |||||| ||||| || ||
Sbjct 35421 ---CCAGTAAG-CAGATGATCCAGGATATCATCACTGATGCCGTCACCATTGAGCAGGAG 35366
Query 102152 TTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAG 102211
|| ||||| | | || || | | | || ||||||| | | |||| |||
Sbjct 35365 TTCCTCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAG 35306
Query 102212 TACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAAT 102271
|||||||| || || || ||| || | || | | || || ||| ||| ||
Sbjct 35305 TACATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGGCAACGAGAAGGTCTACAAG 35246
Query 102272 GTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTT 102331
| |||||||||||| |||||||| || || ||||| | ||||||||||| ||
Sbjct 35245 GCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTC 35186
Query 102332 GAAAAGAGAGTCGCCGAGTATCA 102354
|| ||| | || || || || ||
Sbjct 35185 GAGAAGCGTGTTGCTGACTACCA 35163
>seq1076
Length=4255
Score = 100 bits (110), Expect = 6e-16
Identities = 177/253 (70%), Gaps = 4/253 (2%)
Strand=Plus/Minus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851
|| ||||| |||||||||| || || ||| |||||||| || || ||||||||
Sbjct 1489 CCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATA 1430
Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACT-GTTCCACA 94910
|| || || | | | | | |||||| || || | |||||| ||| || ||
Sbjct 1429 CTGTCGTCCTTCATATCAACCAAGAAGCAAGATGATAATTGGGGC-TGAGGAGTGCCGGC 1371
Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970
||| || || |||||||||||||| || || | | || ||||| |||| ||||| ||
Sbjct 1370 ATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACATCAGATTGTATGTCTC 1311
Query 94971 AATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCT 95029
| ||| | ||| || | | || || | || |||| ||||||||| ||||||| ||
Sbjct 1310 CAAGACTCGCTCGATATCATCACCCCAGA-TACCAACAGACACACGCATGATCATGTGCT 1252
Query 95030 GAGGGCGCTCAAC 95042
|||||||||| ||
Sbjct 1251 GAGGGCGCTCGAC 1239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989553557612955
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |