Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq886 116 3e-21
>seq886
Length=31666
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863
||| | ||| || ||||| || | ||| || ||||||| ||| ||| |||| |||
Sbjct 9975 GTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCCAACTG 10034
Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923
|| || | ||||| | | |||||||| || || ||||| || ||||| | ||| ||
Sbjct 10035 CTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTT 10094
Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983
||| ||| | ||| ||||||| | ||||| |||| |||||||| ||||||||
Sbjct 10095 GCTCTTCACGTTGTCGATAGTGTCACTGGATTCGACCTCAAGGGTGATGGTCTTTCCAGT 10154
Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007
||| || ||||| |||||||||||
Sbjct 10155 AAGGGTCTTCACGAAGATCTGCAT 10178
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/209 (69%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859
|||| || | ||| || ||||| || | ||| ||||| | |||| | ||||| |
Sbjct 10709 CAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAA 10768
Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919
|||| || ||| | || || || | |||||| || || || || || || ||||| | ||
Sbjct 10769 GCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAA 10828
Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979
| || | ||||||| | ||| |||||| | || || || | |||||||| || |
Sbjct 10829 TCTTCGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGC 10888
Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCATG 95008
| || | || || || ||||||||||||
Sbjct 10889 CGGTCAAGGTCTTGACGAAGATCTGCATG 10917
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448277745660360
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |