Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq185 107 3e-19
seq1134 98.7 2e-16
>seq185
Length=32219
Score = 107 bits (118), Expect = 3e-19
Identities = 86/101 (85%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||| | | ||||| ||||| ||||||||||||||||| |||||
Sbjct 318 GCCAAGCGTCACCGAAAGATTT-TGCGAGACAACATTCAAGGAATCACCAAGCCCGCTAT 376
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| ||||||||||| || ||||||||| ||||||
Sbjct 377 CCGACGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCTG 417
Score = 89.7 bits (98), Expect = 8e-14
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| |||| |||| | |||| |||||| || || |||| ||| |
Sbjct 479 TGATCTACGAGGAGACCCGTGGTGTTCTCAAGACCTTCCTTGAGGGTGTCATCCGTGACG 538
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
|| || || || |||||||| || || ||||||||||||||| | || ||||||| |
Sbjct 539 CTGTCACATACACTGAGCACGCCAAGCGCAAGACTGTCACCTCCCTCGACGTCGTCTACG 598
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | || || || || |||| | || ||||| || |||||
Sbjct 599 CCCTCAAGCGACAGGGACGTACTCTCTACGGTTTCGGTGGTTAA 642
>seq1134
Length=25331
Score = 98.7 bits (108), Expect = 2e-16
Identities = 84/101 (83%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || || | ||||| | ||||| |||||||| || ||||||||||| |||||
Sbjct 11090 GCCAAGCGCCACCGAAAGATCT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCTAT 11148
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| |||||||| ||||| ||||||||| | ||||
Sbjct 11149 CCGACGTCTCGCTCGTCGAGGTGGTGTCAAGCGTATTTCTG 11189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79073004748893
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |