Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1076 199 5e-46
seq179 118 1e-21
>seq1076
Length=4255
Score = 199 bits (220), Expect = 5e-46
Identities = 597/912 (65%), Gaps = 16/912 (2%)
Strand=Plus/Minus
Query 62943 ATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTT 63002
|| || ||||||||||| || | ||| || || | || | ||| || |||||
Sbjct 2047 ATAATTTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTG 1988
Query 63003 TTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATA 63062
||| || |||||||| || || |||||||| | || || ||| |||| | || | |
Sbjct 1987 CGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGA 1928
Query 63063 ATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT----T 63117
|| || | ||| | | || ||||||| || | ||| | |||| | || |
Sbjct 1927 ATGGCGTACCAAA-GCTTCTGAGCCTTGATGGTC---TTGCGAC-CCTTGCCCTCCTTCT 1873
Query 63118 CGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATT 63177
|||| | |||| |||||||| ||||| | | | | | ||||| || |
Sbjct 1872 CGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACT 1813
Query 63178 CATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAG 63237
| | || ||||||| | ||| || |||| | | || |||||||| || |||||||
Sbjct 1812 CGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGTTTCATGAAAAGATCAG 1753
Query 63238 GAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTT 63297
| |||||||| || | || ||||| | || | ||||| || || |||||
Sbjct 1752 GGATCCAAAGGGCAAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTAC 1693
Query 63298 TAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTC 63357
||||| ||||| | | | |||||| ||||| || || | ||| ||||| | | | |
Sbjct 1692 GGAGATCCAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCAC 1633
Query 63358 CAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACA 63417
| || || ||||| || ||||| || | || | ||| ||||| || | || | | ||
Sbjct 1632 CGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCA 1573
Query 63418 TTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAA 63477
| |||| |||||| || ||| |||| |||||||||| ||| || ||| | |||||||
Sbjct 1572 TAGGAACAATACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAA 1513
Query 63478 TAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTT 63535
|| | | ||| |||||| || || || ||||| || ||||| | || || ||
Sbjct 1512 TACGGTGCACATT--TAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTT 1455
Query 63536 TAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGA 63595
| || || ||||| ||||| || || || || |||| | || | || || ||
Sbjct 1454 GAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGA 1395
Query 63596 CATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 63655
| |||| | || ||| || ||||| || | || || ||||| ||||| || | ||
Sbjct 1394 TAATTGGGGCTGAGGAGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTT 1335
Query 63656 TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTA 63714
||| | |||||||| ||||| | || || ||||| || || | || |
Sbjct 1334 GCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAGA-TACCAA 1276
Query 63715 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACA 63774
| | |||||||| | |||||||||||| | || || ||||| || ||||| | |
Sbjct 1275 CAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATTTTGAGGA 1216
Query 63775 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAA 63834
||| ||| |||||||| || || ||||| || | |||| || || || || || |
Sbjct 1215 GGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGA 1156
Query 63835 TAATAACCGAGT 63846
||| | ||||
Sbjct 1155 CAATGGCAGAGT 1144
>seq179
Length=39909
Score = 118 bits (130), Expect = 1e-21
Identities = 355/544 (65%), Gaps = 8/544 (1%)
Strand=Plus/Plus
Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377
||| ||||||||||| | | || || |||||||| || || || || ||||| || ||
Sbjct 35465 GTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACC 35524
Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437
|||||| || ||||| || || || ||||| | ||| |||||||| || || || ||
Sbjct 35525 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCGCCACTGAAGAAGATACCCTCAACAGC 35584
Query 33438 AGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCA-CTTTTGAG 33493
||||||||||| || | || || | || | | || || ||||| | || |
Sbjct 35585 AGCAAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATCCATCGGATG-G 35643
Query 33494 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 33553
|||| || ||||||||| | || || || || || ||||| || |||||||| ||
Sbjct 35644 CCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAGAGATATGTTC 35703
Query 33554 tttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 33613
| || || | || || ||||| | || || | || || |||||||
Sbjct 35704 GCTGGGCGGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAGTGAATGT 35763
Query 33614 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTAC 33673
| || || ||||| || |||||||| || | |||||||| ||||| || || ||
Sbjct 35764 TCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGATCTGGACCTCGCCAC 35823
Query 33674 AAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 33733
||||| || | | || || || || || || ||| ||| || || || || | |
Sbjct 35824 TGAATCGCTCGACGAGGTTCTCGTTGACGATACCATCAGAGGCAGCGAAGAAAGCAAGGA 35883
Query 33734 CATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCATTGATATCTT 33790
|| | || | | || || | || | | || ||||| || | | ||| |
Sbjct 35884 TGTGAGAGACGAAGAACTGCTCATCAGCAGTCAGGCGGTTGTTCCAGTCGTGAAGATCCT 35943
Query 33791 TAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCC 33850
| || | ||| | || || | ||||| || || ||||| ||||| || ||||| | ||
Sbjct 35944 TGGAGAGATCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCCTTCTTGTACATTTGCC 36003
Query 33851 AGAT 33854
| ||
Sbjct 36004 AAAT 36007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622928503797160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |