Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016- 06-02] 2,401 sequences; 41,308,709 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1076 89.7 5e-13 seq994 87.8 2e-12 >seq1076 Length=4255 Score = 89.7 bits (98), Expect = 5e-13 Identities = 331/510 (65%), Gaps = 19/510 (4%) Strand=Plus/Minus Query 148238 CTTGCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTT 148297 |||||| || |||||| |||||||| || ||||||| || | || ||||| ||| Sbjct 1886 CTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGC 1827 Query 148298 TAAACCGGGACACTCGTCGGGGCACATCAATGACCATTTCCCTCCTGTCTTT---ACCCT 148354 | || || ||||||| ||||||||||| || ||| | | || ||||| || | Sbjct 1826 GAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGT---CACCGTTCTTTTCAACACG 1770 Query 148355 CTTCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTC 148414 ||||| || |||||||| |||| | ||||| | |||||| || || | ||||| Sbjct 1769 TTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGGGCACGGACCTCCTC 1710 Query 148415 GGCACC---CATATTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTC 148471 ||| | || || ||||||| ||| || || || | |||||||||||| Sbjct 1709 CTTACCGTGGTTCTTACG---GAGATCCAGGAAATCGAAGACATCAGAGTGCCAAGGCTC 1653 Query 148472 GATGTATACGGTCATGGCGCC---TTTCCTTTTACCTCCTTGATCGACATGGCGTAGCA- 148527 || ||| | || | || || | | | || || || || ||||||| || |||| Sbjct 1652 GAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCG-AGCAG 1594 Query 148528 TGCTATTAAAAACACGCAATGCAGGTCCCAATCCCGCCGCAGTTCCGTTTGTGGATTCAA 148587 || | || || ||||| | ||| | | || || || ||||| || | | Sbjct 1593 TGTTGTTGAAGACACGAAGCATAGGAACAATACCATTCGATGTACCGTTGGTACCGGCGA 1534 Query 148588 TTTTACTATTGGTGGCGCGAATTTGAGTG-ACATTCAGGCCGATGCCGCCTCCGTGTTTA 148646 | | || || ||||| | ||| ||||| || || || || || | || Sbjct 1533 TGTATGAGCCAGTAGCACGAATACG-GTGCACATTTAGACCAATACCACCAGCCATCTTG 1475 Query 148647 GATATCATGGCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATG 148706 || ||||||||||| ||||| || | ||||| || | ||||||||| || | || Sbjct 1474 GAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATA 1415 Query 148707 TTAAGCAGGTAGCACGATGACATTTGAGGC 148736 | || || | |||| ||||| | ||| ||| Sbjct 1414 TCAACCAAGAAGCAAGATGATAATTGGGGC 1385 >seq994 Length=39861 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || || || || | || || || |||||||| | || | || || Sbjct 17250 CAAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTC 17309 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 |||||||||||| | ||||| ||||| ||||| || || || || ||||| Sbjct 17310 TTCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 17369 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 || || | ||||| | | ||||| || ||||| |||| | | | | |||||||| Sbjct 17370 CCAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 17429 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || || ||| |||| |||||||| Sbjct 17430 CAACATCCAGAAGGAGTCCACTCTCCACCTGGTCCT 17465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478648034144720