Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1076 396 7e-105
>seq1076
Length=4255
Score = 396 bits (438), Expect = 7e-105
Identities = 1123/1699 (66%), Gaps = 46/1699 (3%)
Strand=Plus/Plus
Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGATATTGTTGAACGCCCGCA 363458
||||| ||||| ||| ||||| ||| | | | ||| | ||||| || ||||| ||
Sbjct 1194 AAGACTTTGGAGCGATCATACCTC-CTCAAAATTGACGGTAAGATTGTCGAGCGCCCTCA 1252
Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCG--CGATT 363516
||| ||| | |||||||| || |||||||| || || || |||| || ||| |
Sbjct 1253 GCACATGATCATGCGTGTGTCTGTTGGTATC---TG---GGGTGATGATATCGAGCGAGT 1306
Query 363517 ----GAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAA 363568
|| ||||| || || |||| || || | |||||||| || | || ||
Sbjct 1307 CTTGGAGACATACAATCTGATGTCTA---GCAAGT-TCTTCACGCATGCTTCCCCCACGC 1362
Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628
| | |||||| || |||| | | || || | || |||||||| | | | |||||||
Sbjct 1363 TCTTCAATGCCGGCACTCCTCAGCCCCAATTATCATCTTGCTTCTTGGTTGATATGAAGG 1422
Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688
|||| || ||||| |||| || || || |||| ||||| | || ||||||| |
Sbjct 1423 ACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGG 1482
Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747
| || || |||||| || | ||| | ||||||| || | | ||||| |||
Sbjct 1483 CTGGTGGTATTGGTCTAAATGTGCACCGTATTCGTGCTACTGG-CTCATACATCGCCGGT 1541
Query 363748 ACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806
|| || ||| |||||||| | ||||| ||||||||||| || |||| ||||| |
Sbjct 1542 ACCAACGG-TACATCGAATGGTATTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 1600
Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866
||| |||||||||||||| ||||| || || ||||| || || |||||||||
Sbjct 1601 GTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTG 1660
Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926
|| | ||| | || || || || || ||||| || ||| || || ||||| | ||
Sbjct 1661 GCACTCTGATGTCTTCGATTTCCTGGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCG 1720
Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986
||| |||||||| ||| ||| |||||| | |||| | ||| ||||| || || ||
Sbjct 1721 TGCCCGTGATCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAACGTGTTGA--A 1778
Query 363987 AGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044
| | | | | ||| |||| | ||||| |||| || || || || |||| |
Sbjct 1779 AAGAACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTAC 1838
Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104
|| || || | | ||||| ||||||||||| || |||||| |||| ||| |||||
Sbjct 1839 GGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAAGACC 1898
Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164
|| || |||||||| |||| ||||| | || | |||| |||||| |||| ||
Sbjct 1899 ATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCCA 1958
Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224
| ||| | ||||| ||| | |||||||||||| |||||| || |||| ||||| | |
Sbjct 1959 TTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACCA-T 2017
Query 364225 CAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283
| | || |||||| || || || ||||| || ||| || || |||||| || ||
Sbjct 2018 CCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGTCGCTGT 2077
Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTACT---TTTGA 364337
|| |||||||| || | | || || | || | | | |||| || | ||
Sbjct 2078 CTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCATCAACTACGATGAAGCTTGCTACGA 2137
Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGA 364397
| | || | | || | || | | || || | |||| || ||||| | |||||
Sbjct 2138 CTTCAAGAAGTTGCATAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCATCGA 2197
Query 364398 CAAGAATTATTATCCAATTCCTGAAGCCGAGC-GTTCTAATATGCGTCATCGCCCGATTG 364456
||| | || || ||| | || | || ||| ||||| || || || ||||
Sbjct 2198 TGTGAACCACTA-CCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCCATTG 2256
Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGATTC 364514
|||||||||| |||||||| ||||| | ||| | ||||| ||| | || || ||
Sbjct 2257 GTCTTGGTGTTCAGGGCCTTGCTGATGCTTTCCT--TGCTCTGCGTATGCCCTTCGAGTC 2314
Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574
|| || ||||||| || || ||| |||||||||| || || ||| || || | ||
Sbjct 2315 ACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTTGAGACCATCTATCACGCTGCCCTCAC 2374
Query 364575 TG-CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTC 364633
|| || |||| | |||| || |||| ||||| || | |||| |||||
Sbjct 2375 TGCCTCCGTG-CAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTCCCCCG 2433
Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693
|| |||| | |||||||||| | ||||| |||| ||| |||| || ||| |||
Sbjct 2434 CCTCTGAGGGTATCCTCCAGTTTGACATGTGGAACGTCAAGCCCTCTGACCTCTGGGACT 2493
Query 364694 GGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGC 364753
|||| || || || | || |||| || || | || ||| || | || |
Sbjct 2494 GGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAACAGTCTGCTCCTCGCTC 2553
Query 364754 CCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTA 364813
| ||||| || || ||| | ||||| | || ||||||||||||||||| || | |
Sbjct 2554 CTATGCCTACTGCCAGTACCTCCCAGATTTTGGGCAACAACGAGTGCTTCGAGCCCTACA 2613
Query 364814 CAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACC 364873
| |||| | || |||||| ||||| | || || || | ||| || || | |
Sbjct 2614 CCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACCCCTGGC 2673
Query 364874 TAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCG 364933
| ||||||| ||| |||| || |||||| || ||||||||| ||||| |
Sbjct 2674 TGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCATCATTG 2733
Query 364934 CCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACA 364993
| | |||||||| | ||||||||||| | || | ||| | ||| || | ||||
Sbjct 2734 CTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCTCTGTACA 2793
Query 364994 AAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTT 365053
| || || ||||| || || ||| || || | ||||| || ||||| ||||| |
Sbjct 2794 AGACTGTCTGGGAGATCTCTCAGCGCCAGGTCGTTCAGATGGCTGCTGATCGAGGTGCCT 2853
Query 365054 TTATCTGTCAGAGCCAGTC 365072
| || |||| ||||||
Sbjct 2854 TCATTGATCAGTCCCAGTC 2872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303313505177582
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |