Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016- 06-02] 2,401 sequences; 41,308,709 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1076 396 7e-105 >seq1076 Length=4255 Score = 396 bits (438), Expect = 7e-105 Identities = 1123/1699 (66%), Gaps = 46/1699 (3%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGATATTGTTGAACGCCCGCA 363458 ||||| ||||| ||| ||||| ||| | | | ||| | ||||| || ||||| || Sbjct 1194 AAGACTTTGGAGCGATCATACCTC-CTCAAAATTGACGGTAAGATTGTCGAGCGCCCTCA 1252 Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCG--CGATT 363516 ||| ||| | |||||||| || |||||||| || || || |||| || ||| | Sbjct 1253 GCACATGATCATGCGTGTGTCTGTTGGTATC---TG---GGGTGATGATATCGAGCGAGT 1306 Query 363517 ----GAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAA 363568 || ||||| || || |||| || || | |||||||| || | || || Sbjct 1307 CTTGGAGACATACAATCTGATGTCTA---GCAAGT-TCTTCACGCATGCTTCCCCCACGC 1362 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 | | |||||| || |||| | | || || | || |||||||| | | | ||||||| Sbjct 1363 TCTTCAATGCCGGCACTCCTCAGCCCCAATTATCATCTTGCTTCTTGGTTGATATGAAGG 1422 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 |||| || ||||| |||| || || || |||| ||||| | || ||||||| | Sbjct 1423 ACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGG 1482 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747 | || || |||||| || | ||| | ||||||| || | | ||||| ||| Sbjct 1483 CTGGTGGTATTGGTCTAAATGTGCACCGTATTCGTGCTACTGG-CTCATACATCGCCGGT 1541 Query 363748 ACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || || ||| |||||||| | ||||| ||||||||||| || |||| ||||| | Sbjct 1542 ACCAACGG-TACATCGAATGGTATTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 1600 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 ||| |||||||||||||| ||||| || || ||||| || || ||||||||| Sbjct 1601 GTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTG 1660 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 || | ||| | || || || || || ||||| || ||| || || ||||| | || Sbjct 1661 GCACTCTGATGTCTTCGATTTCCTGGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCG 1720 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986 ||| |||||||| ||| ||| |||||| | |||| | ||| ||||| || || || Sbjct 1721 TGCCCGTGATCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAACGTGTTGA--A 1778 Query 363987 AGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 | | | | | ||| |||| | ||||| |||| || || || || |||| | Sbjct 1779 AAGAACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTAC 1838 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104 || || || | | ||||| ||||||||||| || |||||| |||| ||| ||||| Sbjct 1839 GGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAAGACC 1898 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 || || |||||||| |||| ||||| | || | |||| |||||| |||| || Sbjct 1899 ATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCCA 1958 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 | ||| | ||||| ||| | |||||||||||| |||||| || |||| ||||| | | Sbjct 1959 TTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACCA-T 2017 Query 364225 CAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283 | | || |||||| || || || ||||| || ||| || || |||||| || || Sbjct 2018 CCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGTCGCTGT 2077 Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTACT---TTTGA 364337 || |||||||| || | | || || | || | | | |||| || | || Sbjct 2078 CTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCATCAACTACGATGAAGCTTGCTACGA 2137 Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGA 364397 | | || | | || | || | | || || | |||| || ||||| | ||||| Sbjct 2138 CTTCAAGAAGTTGCATAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCATCGA 2197 Query 364398 CAAGAATTATTATCCAATTCCTGAAGCCGAGC-GTTCTAATATGCGTCATCGCCCGATTG 364456 ||| | || || ||| | || | || ||| ||||| || || || |||| Sbjct 2198 TGTGAACCACTA-CCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCCATTG 2256 Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGATTC 364514 |||||||||| |||||||| ||||| | ||| | ||||| ||| | || || || Sbjct 2257 GTCTTGGTGTTCAGGGCCTTGCTGATGCTTTCCT--TGCTCTGCGTATGCCCTTCGAGTC 2314 Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574 || || ||||||| || || ||| |||||||||| || || ||| || || | || Sbjct 2315 ACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTTGAGACCATCTATCACGCTGCCCTCAC 2374 Query 364575 TG-CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTC 364633 || || |||| | |||| || |||| ||||| || | |||| ||||| Sbjct 2375 TGCCTCCGTG-CAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTCCCCCG 2433 Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693 || |||| | |||||||||| | ||||| |||| ||| |||| || ||| ||| Sbjct 2434 CCTCTGAGGGTATCCTCCAGTTTGACATGTGGAACGTCAAGCCCTCTGACCTCTGGGACT 2493 Query 364694 GGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGC 364753 |||| || || || | || |||| || || | || ||| || | || | Sbjct 2494 GGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAACAGTCTGCTCCTCGCTC 2553 Query 364754 CCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTA 364813 | ||||| || || ||| | ||||| | || ||||||||||||||||| || | | Sbjct 2554 CTATGCCTACTGCCAGTACCTCCCAGATTTTGGGCAACAACGAGTGCTTCGAGCCCTACA 2613 Query 364814 CAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACC 364873 | |||| | || |||||| ||||| | || || || | ||| || || | | Sbjct 2614 CCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACCCCTGGC 2673 Query 364874 TAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCG 364933 | ||||||| ||| |||| || |||||| || ||||||||| ||||| | Sbjct 2674 TGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCATCATTG 2733 Query 364934 CCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACA 364993 | | |||||||| | ||||||||||| | || | ||| | ||| || | |||| Sbjct 2734 CTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCTCTGTACA 2793 Query 364994 AAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTT 365053 | || || ||||| || || ||| || || | ||||| || ||||| ||||| | Sbjct 2794 AGACTGTCTGGGAGATCTCTCAGCGCCAGGTCGTTCAGATGGCTGCTGATCGAGGTGCCT 2853 Query 365054 TTATCTGTCAGAGCCAGTC 365072 | || |||| |||||| Sbjct 2854 TCATTGATCAGTCCCAGTC 2872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303313505177582