Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016- 06-02] 2,401 sequences; 41,308,709 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq886 107 2e-18 >seq886 Length=31666 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||||||| || ||||||| |||| || ||||| || Sbjct 10916 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 10857 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| | ||| | || | ||| ||||| || || || || || ||||| Sbjct 10856 GACACTATCGACAACGTCAAGTCGAAGATTCA-GGACAAGGAGGGCATCCCCCCCGACCA 10798 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || | ||||| |||||||| || | || || | |||||| | |||||||| Sbjct 10797 GCAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAA 10738 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || ||||| || ||| | || || Sbjct 10737 CATTCAGAAGGAGTCCACTCTTCATCTTGTTCT 10705 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || ||||||| | || || || || | Sbjct 10178 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAGACCATCACCCTTGAGGTCGAATCCAGT 10119 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| ||||| || || ||||| || || || || ||||| || Sbjct 10118 GACACTATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGATCAG 10059 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || || || || || || ||||||| |||||| || |||| ||||| Sbjct 10058 CAGCGTCTTATCTTCGCTGGTAAGCAGTTGGAAGATGGTCGCACCTTGAGCGACTACAAC 9999 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || || || || || Sbjct 9998 ATCCAGAAGGAGTCAACTCTTCA 9976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433315319874815