Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq179 389 7e-103
seq1076 300 3e-76
>seq179
Length=39909
Score = 389 bits (430), Expect = 7e-103
Identities = 601/846 (71%), Gaps = 18/846 (2%)
Strand=Plus/Minus
Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368
|||||||||||||| || ||| |||||| || ||||||||||| || |||||||
Sbjct 35998 ATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTCTCCAAGGAT 35939
Query 42369 ACGGCCGGCTGGGAGTCA-----CTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATAC 42423
|| |||| | || ||| ||| | || |||| ||| || |||| |
Sbjct 35938 CTTCACGACTGGAA--CAACCGCCTGACTGCTGATGAGCAGTTCTTCGTCTCTCACATCC 35881
Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483
| || |||||||| |||||||| || || ||||| |||||||| | | | ||||
Sbjct 35880 TTGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTCGTCGAGCGATTCAGTG 35821
Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543
||||| ||| | ||||| || |||||||||||||||||||| || ||||||
Sbjct 35820 GCGAGGTCCAGATCCCCGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGATGGAGAACA 35761
Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTA 42603
| ||||| ||| ||| || || || |||| |||||| ||| |||| | |||| |
Sbjct 35760 TTCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAAGGAGCCCGCCCAGCGAA 35701
Query 42604 ACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGC 42663
|| ||||| ||||| ||||| || ||||||||| |||||||| ||||||||
Sbjct 35700 CATATCTCTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCA 35641
Query 42664 TCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCG 42723
|| |||||| || | ||| | | || | | || | || || |||||| | || |
Sbjct 35640 TCCGATGGATCCAGGATAAGGACTCCTCCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCTG 35581
Query 42724 TCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-GGTG 42782
| ||||| ||||||||| |||||||||||||| ||||||||||||||| || |||
Sbjct 35580 TTGAGGGTATCTTCTTCAGTGGCGCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTC 35521
Query 42783 TCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGG 42842
|| ||||| || || |||||||| ||||| |||||| | |||||||| || || |
Sbjct 35520 TC-ATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACT 35462
Query 42843 GACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCTCGAAGGAGCGGGT 42901
||||||||||||||||| ||| |||||| ||| | | || ||| || | |
Sbjct 35461 GACTTTGCCTGCCTCCTCCACTC---TCACCTCAAGGGTCGTG-CCAGTAAGCAGATGAT 35406
Query 42902 CCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC 42961
|| || |||||||| || ||||| || ||| ||||||||||||| | | || ||
Sbjct 35405 CCAGGATATCATCACTGATGCCGTCACCATTGAGCAGGAGTTCCTCACCGAAGCTCTTCC 35346
Query 42962 C-GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCG 43020
| ||| |||| ||||||||||| ||||||||| ||||||| ||| |||||| |
Sbjct 35345 CTGTG-CCCTCCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTG 35287
Query 43021 ACCATCTCC-TGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGAC 43079
| | ||||| ||| | ||| || | ||||||| | | ||||||||||
Sbjct 35286 ATCGTCTCCTTGTCGCTCTTGGCAACGAGAAG-GTCTACAAGGCCACCAACCCCTTCGAC 35228
Query 43080 TTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGAC 43139
|| |||||||||||||| | | |||||||||||||| ||||||||||| || || |||
Sbjct 35227 TTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGCTGAC 35168
Query 43140 TACCAG 43145
||||||
Sbjct 35167 TACCAG 35162
>seq1076
Length=4255
Score = 300 bits (332), Expect = 3e-76
Identities = 884/1343 (66%), Gaps = 41/1343 (3%)
Strand=Plus/Minus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| || ||||| ||||| || | || || ||||| ||||||| ||| | || ||
Sbjct 2666 GTTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGG 2607
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
||||| || ||| ||||||||| ||||| | || || ||||| ||||| || | |
Sbjct 2606 CTCGAAGCACTCGTTGTTGCCCAAAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCGAG 2547
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGA-TGCGGAGTCTGAGCTCGTTCCAGTCCC 244268
||||||||||| | | |||||| ||| || | | || |||| |||| |
Sbjct 2546 GAGCAGACTGTTACGGATGCCGTGTGTCTTGACTTC-----CT---CTCGAAG-AGTCTC 2496
Query 244269 ACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGC 244328
|| ||| ||||||| | | |||| | ||||||||||||||| || | ||||
Sbjct 2495 CCAGTCCC-AGAGGTCAGAGGGCTTGACGTTCCACATGTCAAACTGGAGGATACCCTCAG 2437
Query 244329 TGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTC 244387
| ||||| |||| | |||| | ||||||||| || || ||||||| || |
Sbjct 2436 AGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAGG 2377
Query 244388 TCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTG 244447
|| |||||| |||| ||||||||||| |||||| |||||| | || || |||| |
Sbjct 2376 CAGT-GAGGGCAGCGTGATAGATGGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCG 2318
Query 244448 CCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATG 244507
| |||||| || | || | ||| | || || || ||||| || || |
Sbjct 2317 GGTGACTCGAAGGGCATACGCAGAGCAAGGAAAGCATCAGCAAGGCCCTGAACACCAAGA 2258
Query 244508 CCGATGGGTCTGTGTCGCTTGTTGGAGC-GCATGGCTTCGGGCACGGGGTAAAAGTTGCC 244566
|| ||||||| ||| ||| |||| | || | || | || || ||||| ||| |
Sbjct 2257 CCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGG-ACAGGGTAGTGGTTCAC 2199
Query 244567 GTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGAC-GACGTCGGCCAGCAGCTGAA 244625
||||| | |||||| |||||||| | | || | ||| ||| | || | || |
Sbjct 2198 ATCGATGATCTTGTTCAGGTTGCGAATAA-CAACCTGACTGACCTTATGCAACTTCTTGA 2140
Query 244626 AGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGC 244685
||||||| | | | || ||| | || ||| | | | || | ||
Sbjct 2139 AGTCGTA---GCAAGCTTCATCGTAGTTGATGA-----AGGAGGGCAGAGACAGAGA--- 2091
Query 244686 TGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGA 244745
||| ||||||||||| || ||||| || | | ||||| || ||| || ||||| |
Sbjct 2090 -GGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAAA 2032
Query 244746 GGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCT 244805
|||| || |||||| || |||| || || ||| |||| ||||||||| ||||
Sbjct 2031 GGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCT 1972
Query 244806 TGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGT 244865
||||||||||||| || |||||||| |||||| | || | | || ||| || |
Sbjct 1971 TGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCT 1912
Query 244866 CCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCT 244925
| |||||||| ||| ||||| |||||||||| |||||| |||||| ||||
Sbjct 1911 TCTGAGCCTTGATGGTCTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCT 1852
Query 244926 CGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCC 244985
||||||| || || ||| | ||||| |||||| |||||||| || |||
Sbjct 1851 CGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCC 1792
Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045
| || ||| | | || | | |||||| || || |||||||| ||||| |||| |
Sbjct 1791 AGTCACCGTTCTTTTCAACACGTTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAAA 1732
Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105
| || | || | ||| ||| || |||||| | || |||| || || ||||
Sbjct 1731 GATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAAATCGAAGA 1672
Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165
| || |||||| ||||| | ||||| || | || ||||| ||||||||||| ||||
Sbjct 1671 CATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCT 1612
Query 245166 GGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTA 245221
|||| | ||| | ||||| |||||||| || || |||| || || || ||
Sbjct 1611 GGTCGA-CATAC---CGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAATACCATTC 1556
Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCC-CTTGC-CCCTGAGGTTGCTGATGGACA 245279
|| |||||||| || |||||| | ||| | || | | | ||| || | |
Sbjct 1555 GATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATTTAGA 1496
Query 245280 TGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGC 245339
|| | || || || ||||||||| | ||| ||| |||||| || || || |
Sbjct 1495 --CCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTC 1438
Query 245340 CCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGC 245399
|||| || ||||| |||||| | | || ||||| || || | ||||||| ||
Sbjct 1437 CCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGATAATTGGGGCTGAGGAG 1378
Query 245400 TGCACGAGTTGAACAGAGTGGGG 245422
||| | ||||| || ||||||
Sbjct 1377 TGCCGGCATTGAAGAGCGTGGGG 1355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944310858019760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |