Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq1076 188 7e-43
>seq1076
Length=4255
Score = 188 bits (208), Expect = 7e-43
Identities = 940/1487 (63%), Gaps = 30/1487 (2%)
Strand=Plus/Plus
Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955
|||| || || ||||| || || || || ||| || | || || || ||| || |
Sbjct 1354 CCCCCACGCTCTTCAATGCCGGCACTCCTCAGCCCCAATTATCATCTTGCTTCTTGGTTG 1413
Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015
| |||| |||| || ||||| | ||| | |||||| |||||| | ||||
Sbjct 1414 ATATGAAGGACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCT 1473
Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTA 94073
| || || || || || || | | ||| ||| |||| ||||| | || || ||
Sbjct 1474 CCAAGATGGCTGGTGGTATTGGTCTAAATGTGCAC--CGTATTCGTGCTACTGGCTCATA 1531
Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133
|||| ||||||||| || || || || || | || |||||||| || |||||||||||
Sbjct 1532 CATCGCCGGTACCAACGGTACATCGAATGGTATTGTTCCTATGCTTCGTGTCTTCAACAA 1591
Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193
| | || || || || ||||||||||| | | | ||| |||| || |||| ||
Sbjct 1592 CACTGCTCGGTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCT 1651
Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253
|||||| |||||| | || || | |||| | || || || ||||||||||| || ||
Sbjct 1652 CGAGCCTTGGCACTCTGATGTCTTCGATTTCCTGGATCTCCGTAAGAACCACGGTAAGGA 1711
Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313
|| | ||| | || || ||| || || ||| | || || ||||| ||||||||
Sbjct 1712 GGAGGTCCGTGCCCGTGATCTTTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAACG 1771
Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373
|| || || ||| | ||||| || | || ||||| || || || || || ||||
Sbjct 1772 TGTTGAAAAGAACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGA 1831
Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433
| | ||| | || || | |||| | ||||| | ||||||||| |
Sbjct 1832 CTGCTACGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCG 1891
Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493
||| || | ||| |||||| ||| | || | || | ||| ||||| ||
Sbjct 1892 CAAGACCATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGG 1951
Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553
| || | ||| | | |||||| | |||| |||| |||||| || |||||||
Sbjct 1952 AAACCCATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGG 2011
Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613
||| ||||| || || ||||| || ||| ||||||| | | || |||||| |
Sbjct 2012 TACCATCCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCCCCTGACGAGGT 2071
Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTC 94673
||||| || ||||| | ||| | ||| || | ||| | | | ||||
Sbjct 2072 CGCTGTCTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCAT-CAA-----CTAC---GA 2122
Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT--GAAC 94731
| |||| | ||| | || || | || | | | ||| || | || |||
Sbjct 2123 TGAAGCTTGCTACGACTTCAAGAAGTTGCATAAGGT--CAGTCAGGTTGTTATTCGCAAC 2180
Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791
||||||| | | ||||| |||| |||||| |||| |||||| ||| ||| ||
Sbjct 2181 CTGAACAAGATCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATG 2240
Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGT 94851
|| || ||||| || | || || ||||| | || || || | | |||||
Sbjct 2241 CGCCACCGACCCATTGGTCTTGGTGTTCAGGGCCTTGCTGATGCTTTCCTTGCTCTGCGT 2300
Query 94852 CTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTAT 94911
|||||| ||| || ||| || | | || | | || || || | ||| |||
Sbjct 2301 ATGCCCTTCGAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTTGAGACCATCTAT 2360
Query 94912 TACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCG 94971
||| ||| | | ||||| || |||| | ||| | || || || |
Sbjct 2361 CACGCTGCCCTCACTGCCTCCGTGCAGCTGGCTA---AGGAGGAGGGTCCCTACTCCACC 2417
Query 94972 TTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCC 95031
||| || || ||| |||| || | ||||| ||| | ||| || ||||||
Sbjct 2418 TTCAAGGGTTCCCCCGCCTCTGAGGGTATCCTCCAGTTTGACATGTGGAACGTCAAGCCC 2477
Query 95032 TCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAAC 95091
|| | || | |||||||| |||| || | || || | | |||||| | |||
Sbjct 2478 TCTGACCTCTGGGACTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAAC 2537
Query 95092 GCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAG 95151
||||| | || || ||||| || ||| || | ||||| | ||||||||||||
Sbjct 2538 AGTCTGCTCCTCGCTCCTATGCCTACTGCCAGTACCTCCCAGATTTTGGGCAACAACGAG 2597
Query 95152 TCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCC 95211
| ||||| |||| ||||||||| | ||| | | || || ||||| || || ||||
Sbjct 2598 TGCTTCGAGCCCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAG 2657
Query 95212 GTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTGACAAGGT 95270
|| ||||| || || ||||| || || | ||||| ||||| || |
Sbjct 2658 GTTGTCAACCCCTGGCTGCTCAAGGACCTTGTCGAC-ATGGGTCTGTGGTCCGATGCTAT 2716
Query 95271 CAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGG 95326
||||||| | |||| | || || ||| | |||||||| || | || || |
Sbjct 2717 GAAGAACCGCATCATTGCT----GAGAATGGTTCCATTCAGAACATTCCCAACATCCCTG 2772
Query 95327 AGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373
|| ||||||| || |||||||| || ||||||||| | ||||||
Sbjct 2773 CCGATGTCAAGGCTCTGTACAAGACTGTCTGGGAGATCTCTCAGCGC 2819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494708352119960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |