Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq179 172 9e-38
>seq179
Length=39909
Score = 172 bits (190), Expect = 9e-38
Identities = 365/539 (68%), Gaps = 7/539 (1%)
Strand=Plus/Plus
Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687
||||| ||| | | ||| ||||||||| |||||||||||||| | | ||| ||
Sbjct 35159 CTTCTGGTAGTCAGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTT 35218
Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747
|||||||| |||| ||||| | | | ||| |||| || ||||| | ||
Sbjct 35219 CTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCAAGAGCGACAAG 35278
Query 159748 CAACCTGTCTGCCACAAATTCGATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCA 159806
| | || || || || || ||||| || | ||| | ||| |||| || || || |
Sbjct 35279 GAGACGATCAGCGACGAACTCAATGTA-CTGCTTCATGAGGTCAGAGTTCATGCCGAGGA 35337
Query 159807 GCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAA 159866
| | ||| || ||||| | || ||||||| |||||| ||| || || || | |
Sbjct 35338 GGGCACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGA 35397
Query 159867 TCTGCGAGA-CACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCAC 159925
| | | || || | | ||| ||| | || || ||| ||||||||
Sbjct 35398 TATCCTGGATCATCTGCTTACT--GGCACGACCCT--TGAGGTGAGAGTGGAGGAGGCAG 35453
Query 159926 GCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCC 159985
|||||||| ||| || |||||||| |||||||||| ||||||||| | | | || ||
Sbjct 35454 GCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCA 35513
Query 159986 GGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATC 160045
||||||| |||||| |||||||| || || | || || || || || || |||||
Sbjct 35514 GGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCGCCACTGAAGAAGATA 35573
Query 160046 CCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTC 160105
||||| || || ||||| || ||||| | || |||| |||| || | || ||| ||
Sbjct 35574 CCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATC 35633
Query 160106 CACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAA 160164
|| | ||||||| |||||||||||| |||||| || ||| ||| | |||||| ||
Sbjct 35634 CATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAA 35692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795131335404560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |