Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq458 284 2e-71
seq1076 123 3e-23
seq843 93.3 5e-14
>seq458
Length=40226
Score = 284 bits (314), Expect = 2e-71
Identities = 981/1529 (64%), Gaps = 27/1529 (2%)
Strand=Plus/Minus
Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628
||||| || || || ||||| || ||||| | | ||| || || || || || ||
Sbjct 21554 TCATCCTCCTCCTTGTACTTCTCAGCATCGTTAAGCATGCGCTCGATCTCCTCCTTGGAC 21495
Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688
| | ||||| ||||| ||||| |||||| | ||| || || | | |||| || |
Sbjct 21494 AGGCGGCCCTTGTCATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACG 21435
Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748
|| || |||| ||||| || ||||||| |||||| | || | ||| || || |
Sbjct 21434 GCGGAGACGTTCATGATACCGTTGGCATCAAGATCGAAGGTGACCTCAATCTGGGGAACA 21375
Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808
|| | || || | || ||||| || | || || | || | | | |||| ||| |
Sbjct 21374 CCACGAGGAGCAGGGGGGATACCAGTGAGCTCGAACTTGCCCATAAGATTGTTGTCCTTA 21315
Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868
| | ||| ||||| || ||||| | || || |||| || || ||
Sbjct 21314 GTGCGTTGACGCTCACCCTCGTAGACCTGGATAAGAACACCAGGCTGGTTGTCGGAGAAG 21255
Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928
|| ||||||| | ||||| | || || || || || | || |||| | ||||
Sbjct 21254 GTGGAGAAGACCTCAGACTTCTTTGTGGGGATGGTGGTGTTGCGGGGGATAAGCTTGGTC 21195
Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988
|| |||||||| || |||| || ||||| || || | || || ||| | ||||
Sbjct 21194 ATCATACCACCAGCGGTCTCGATACCGAGAGAGAGGGGGGCGACATC---GAGAAGCAGG 21138
Query 6989 -TCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGACC 7036
||| | || || |||| |||| | | || ||||| |||||
Sbjct 21137 ATCTCG------TTGGTGGCCTTGCTGGAGGTATCACCGGAGAGAATCGCGGCCTGGACG 21084
Query 7037 GTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTA 7096
| || ||||| || || |||||||| ||||| || | || || | || || |||||
Sbjct 21083 GCGGCACCGTAGGCAACAGCCTCATCAGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTG 21024
Query 7097 AAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACG 7156
|| || || | | | | || | || || || || || |||||||| | ||
Sbjct 21023 AAGTAGTCGGTAATGAGCTTCTGGACACGGGGAATACGGGTAGAGCCACCGACGAGGACA 20964
Query 7157 ATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCC 7216
|| || | || || || |||||||| | ||| || ||||| || |
Sbjct 20963 ATCTCGTGGACAAGAGACTTGTCGATCTTGGCGTCGGTGAGGACACGGTCGACGGGCTGG 20904
Query 7217 ATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTA 7276
|| ||||| | ||| || || ||||| ||||| |||||||| || || ||
Sbjct 20903 ATGGTGGATCGGAAGAGATCCTGGCAGAGCTCCTCGAAACGAGCACGGGTGATAGAGGTG 20844
Query 7277 TAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGAT 7336
||||| |||| || ||| | | || || || || || | || || || | || ||
Sbjct 20843 TAGAAGTCAATACCCTCGAAGAGAGAGTCGATCTCGATAGAGGTCTGAGCAGAAGAGGAA 20784
Query 7337 AACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCG 7396
| |||||||| || || ||||| || ||||| | ||| || || || || ||| |
Sbjct 20783 AGTGTTCGCTTGGCACGTTCACAAGCAGTTCGGAGACGTCGCAGAGCGCGGACGTTGGTG 20724
Query 7397 GAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAA 7456
|| || ||||| ||| | ||| || || | |||||| | || |
Sbjct 20723 CTAAGGTCCTTCTTGAATTTCCTTTTGAATTCGTTTACGAAGTGGTTGACCAGACGGTTG 20664
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || ||||||||||||||||| || || || || || | ||||| || ||||||||
Sbjct 20663 TCAAAGTCTTCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCC 20604
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| |||||| | | | || ||||| || || |||||||| || || || || || |||
Sbjct 20603 TCCTCAATGGTAAGGAGAGACACATCGAAAGTGCCACCACCAAGATCGAAGATCAGGACG 20544
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | || ||||| || |||||||| || || || || || || |||||
Sbjct 20543 TTGCGCTCGCCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCAGTAGGTTCG 20484
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || || || ||| ||| || || || || | ||||| || || ||||| ||
Sbjct 20483 TTGATGATTCGGAGAACGTTAAGACCGGCGATGAGACCAGCATCCTTGGTGGCTTGACGC 20424
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| |||||||| |||||||| ||||| || || || |||| |||| ||| || ||
Sbjct 20423 TGAGAATCGTTGAAGTAGGCAGGGACAGTAACAACGGCGTTGTTGACAGTCTCGCCAAGG 20364
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| || || ||| | || ||| |||||||| | ||| | || ||||| || | |
Sbjct 20363 TAAGACTCAGCGGTCTCGCGCATCTTGGTAAGGATCATAGCAGAGATCTCCTCGGGGGTG 20304
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876
|| || || || || || || || || || || |||| ||| || | | |
Sbjct 20303 AAGGTCTTGGTCTCGCCCTTGAACTCGACCTCGATGTTGGGCTTA---CCACCCTTGTCG 20247
Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936
| | ||| | | ||| ||||||||| | || |||| ||| | ||||| |
Sbjct 20246 ACGATCTTGAAGGGGAAATGCTTCATATCGGCCTGAACCTCAGCGTCGGCGAACTTGCGA 20187
Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996
||||| | ||||| || || || || ||||| | |||||||| || |||||||||
Sbjct 20186 CCGATCAATCGCTTGGCGTCGAAGACAGTGTTCTGAGGGTTCATAGCGACTTGGTTCTTG 20127
Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056
|| || || || || ||||| || | || || || ||||| | || ||||| |||
Sbjct 20126 GCGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGTAGTT 20070
Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTC 8085
|| || || |||||||| || || || ||
Sbjct 20069 CGGTTACCCTGGTCGTTGGCGATGATATC 20041
>seq1076
Length=4255
Score = 123 bits (136), Expect = 3e-23
Identities = 529/824 (64%), Gaps = 39/824 (5%)
Strand=Plus/Minus
Query 105319 ATCGTACCAACGTGTTTATGGTTCGACTTTTCATTACACGCGTCTTTGTAAAGCATATAT 105378
|| ||||| | || || ||||| ||| || || || || ||||| ||||| ||
Sbjct 2017 ATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAT 1958
Query 105379 GGGGTTCCCGTTTCACTTTGGGATTTAATAATTGCTTTCCAAATCTCCGAAGC-----TG 105433
||| |||| || ||| | |||| | || ||| || | ||||| || | ||| ||
Sbjct 1957 GGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTGATG 1898
Query 105434 GTACAACTTTAG----TTGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTTCAAAC 105489
|| ||| | |||| | ||||| ||||| || ||||| ||| | || |||
Sbjct 1897 GT----CTTGCGACCCTTGCCCT-CCTTC----TCGTACTTTTCGTACAGAGCCTCGAAC 1847
Query 105490 TCTTTACCGTACACGTCTGAAAGACCCTTTGCCTGATCAGGACAAAACAATGACCAATTA 105549
|| | ||||| ||| | || || || | || || | || || ||| | |
Sbjct 1846 TCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCA 1787
Query 105550 CCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGC--TGAAAAGAGGT 105607
|| | |||||| ||||||||||| | ||| || ||||| | ||| ||||||| |
Sbjct 1786 CCGTTCTTTTCAACACGTTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAAAGA--T 1729
Query 105608 CTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATAT 105667
| || | |||| || | ||| || ||| ||| | || || ||||||| | ||
Sbjct 1728 CACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAAATCGAAGACAT 1669
Query 105668 CGGCGTGCCATGGTTCTAAATAGACTGCAATAG-ACC------CTTTACGACGCCCCGCT 105720
| | |||||| || || | |||| |||| || ||| ||| | ||| | |
Sbjct 1668 CAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTT---GTTGCCAC-CC 1613
Query 105721 TGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGAT 105780
|| | |||||| | || || ||| | || || | ||| |||| |||||||| |||
Sbjct 1612 TGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAATACCATTCGAT 1553
Query 105781 GTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCA 105840
|| || || || || || | ||| | | ||||| | | ||| || | || |||
Sbjct 1552 GTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATTTAGACCA 1493
Query 105841 ATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCG 105900
||||| |||||| ||| ||| ||||| || | |||||||| || || ||
Sbjct 1492 ATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCA 1433
Query 105901 ATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTG-GGTGTACC 105959
||||| || ||||| | ||| || ||| || ||||| | ||| || ||| || || ||
Sbjct 1432 ATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGATAATTG-GGGCTGAGGAGTGCC 1374
Query 105960 AGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTT--TCGATAACGCTTCGTAT 106017
|||||||| || || || | ||||| |||| || ||| | || | | | ||||
Sbjct 1373 GGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAA--CTTGCTAGACATCAGATTGTAT 1316
Query 106018 GTTTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAGAGA 106077
|| |||| ||| | || ||||| | || ||||||| || || ||||| |
Sbjct 1315 GTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGACACACGCATGATCATG 1256
Query 106078 TATTGGGGTGTTTCAATAATTTCACCGTCAATTTTCTGGAGATA 106121
| || || || | ||| | |||||||||||| |||| ||
Sbjct 1255 TGCTGAGGGCGCTCGACAATCTTACCGTCAATTTTGAGGAGGTA 1212
>seq843
Length=80993
Score = 93.3 bits (102), Expect = 5e-14
Identities = 169/244 (69%), Gaps = 5/244 (2%)
Strand=Plus/Minus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||| |||||||| | || || || || ||||| || ||| || ||||||||
Sbjct 68857 ATCGAAATCCTCACCACCGAGATGGGTGTCACCAGCGGTAGCCAGGACCTCGAAGATACC 68798
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
| |||||| | | || ||||| || ||||||||||| || || | || |
Sbjct 68797 GTCATCAATGGAGAGAAGGGAGACATCGAAGGTACCACCACCGAGATCGTA---GACGAT 68741
Query 7576 GTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634
| || | ||| || | | | |||| || |||||||| |||||||| || || || || |
Sbjct 68740 GATC-TGTCGCTCACCGTCGGTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTGGGCT 68682
Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694
| || | || || ||| ||| || || ||||| | | ||||| || || || ||||
Sbjct 68681 CGTTGACGATTCGGAGAACGTTGAGACCGGCAATGATACCGGCATCCTTGGTGGCCTGTC 68622
Query 7695 GTTG 7698
| ||
Sbjct 68621 GCTG 68618
Score = 86.0 bits (94), Expect = 8e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763
|||| |||||||| ||||| || ||||| |||| ||||| ||||||||||| || |
Sbjct 68559 CGTTGAAGTAGGCAGGGACGGTAACGACGGCGTGGGTGACCTTCTTACCGAGGTAGCCCT 68500
Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823
| |||| || ||||| ||| ||||||||| | || ||||| |||| | ||||| |
Sbjct 68499 CAGCGACCTCCTTCATCTTGCCAAGAACCATAGCAGAGATCTCCTCAGGAGTGAACTGCT 68440
Query 7824 TC 7825
||
Sbjct 68439 TC 68438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635113738076840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |