Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016- 06-02] 2,401 sequences; 41,308,709 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq458 284 2e-71 seq1076 123 3e-23 seq843 93.3 5e-14 >seq458 Length=40226 Score = 284 bits (314), Expect = 2e-71 Identities = 981/1529 (64%), Gaps = 27/1529 (2%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| || || || ||||| || ||||| | | ||| || || || || || || Sbjct 21554 TCATCCTCCTCCTTGTACTTCTCAGCATCGTTAAGCATGCGCTCGATCTCCTCCTTGGAC 21495 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| ||||| ||||| |||||| | ||| || || | | |||| || | Sbjct 21494 AGGCGGCCCTTGTCATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACG 21435 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || |||| ||||| || ||||||| |||||| | || | ||| || || | Sbjct 21434 GCGGAGACGTTCATGATACCGTTGGCATCAAGATCGAAGGTGACCTCAATCTGGGGAACA 21375 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || | || ||||| || | || || | || | | | |||| ||| | Sbjct 21374 CCACGAGGAGCAGGGGGGATACCAGTGAGCTCGAACTTGCCCATAAGATTGTTGTCCTTA 21315 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | ||| ||||| || ||||| | || || |||| || || || Sbjct 21314 GTGCGTTGACGCTCACCCTCGTAGACCTGGATAAGAACACCAGGCTGGTTGTCGGAGAAG 21255 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || ||||||| | ||||| | || || || || || | || |||| | |||| Sbjct 21254 GTGGAGAAGACCTCAGACTTCTTTGTGGGGATGGTGGTGTTGCGGGGGATAAGCTTGGTC 21195 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || |||||||| || |||| || ||||| || || | || || ||| | |||| Sbjct 21194 ATCATACCACCAGCGGTCTCGATACCGAGAGAGAGGGGGGCGACATC---GAGAAGCAGG 21138 Query 6989 -TCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGACC 7036 ||| | || || |||| |||| | | || ||||| ||||| Sbjct 21137 ATCTCG------TTGGTGGCCTTGCTGGAGGTATCACCGGAGAGAATCGCGGCCTGGACG 21084 Query 7037 GTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTA 7096 | || ||||| || || |||||||| ||||| || | || || | || || ||||| Sbjct 21083 GCGGCACCGTAGGCAACAGCCTCATCAGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTG 21024 Query 7097 AAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACG 7156 || || || | | | | || | || || || || || |||||||| | || Sbjct 21023 AAGTAGTCGGTAATGAGCTTCTGGACACGGGGAATACGGGTAGAGCCACCGACGAGGACA 20964 Query 7157 ATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCC 7216 || || | || || || |||||||| | ||| || ||||| || | Sbjct 20963 ATCTCGTGGACAAGAGACTTGTCGATCTTGGCGTCGGTGAGGACACGGTCGACGGGCTGG 20904 Query 7217 ATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTA 7276 || ||||| | ||| || || ||||| ||||| |||||||| || || || Sbjct 20903 ATGGTGGATCGGAAGAGATCCTGGCAGAGCTCCTCGAAACGAGCACGGGTGATAGAGGTG 20844 Query 7277 TAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGAT 7336 ||||| |||| || ||| | | || || || || || | || || || | || || Sbjct 20843 TAGAAGTCAATACCCTCGAAGAGAGAGTCGATCTCGATAGAGGTCTGAGCAGAAGAGGAA 20784 Query 7337 AACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCG 7396 | |||||||| || || ||||| || ||||| | ||| || || || || ||| | Sbjct 20783 AGTGTTCGCTTGGCACGTTCACAAGCAGTTCGGAGACGTCGCAGAGCGCGGACGTTGGTG 20724 Query 7397 GAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAA 7456 || || ||||| ||| | ||| || || | |||||| | || | Sbjct 20723 CTAAGGTCCTTCTTGAATTTCCTTTTGAATTCGTTTACGAAGTGGTTGACCAGACGGTTG 20664 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || ||||||||||||||||| || || || || || | ||||| || |||||||| Sbjct 20663 TCAAAGTCTTCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCC 20604 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | || ||||| || || |||||||| || || || || || ||| Sbjct 20603 TCCTCAATGGTAAGGAGAGACACATCGAAAGTGCCACCACCAAGATCGAAGATCAGGACG 20544 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || ||||| || |||||||| || || || || || || ||||| Sbjct 20543 TTGCGCTCGCCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCAGTAGGTTCG 20484 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || || || ||| ||| || || || || | ||||| || || ||||| || Sbjct 20483 TTGATGATTCGGAGAACGTTAAGACCGGCGATGAGACCAGCATCCTTGGTGGCTTGACGC 20424 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || |||||||| |||||||| ||||| || || || |||| |||| ||| || || Sbjct 20423 TGAGAATCGTTGAAGTAGGCAGGGACAGTAACAACGGCGTTGTTGACAGTCTCGCCAAGG 20364 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || ||| | || ||| |||||||| | ||| | || ||||| || | | Sbjct 20363 TAAGACTCAGCGGTCTCGCGCATCTTGGTAAGGATCATAGCAGAGATCTCCTCGGGGGTG 20304 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 || || || || || || || || || || || |||| ||| || | | | Sbjct 20303 AAGGTCTTGGTCTCGCCCTTGAACTCGACCTCGATGTTGGGCTTA---CCACCCTTGTCG 20247 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | | ||| | | ||| ||||||||| | || |||| ||| | ||||| | Sbjct 20246 ACGATCTTGAAGGGGAAATGCTTCATATCGGCCTGAACCTCAGCGTCGGCGAACTTGCGA 20187 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| | ||||| || || || || ||||| | |||||||| || ||||||||| Sbjct 20186 CCGATCAATCGCTTGGCGTCGAAGACAGTGTTCTGAGGGTTCATAGCGACTTGGTTCTTG 20127 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || || || ||||| || | || || || ||||| | || ||||| ||| Sbjct 20126 GCGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGTAGTT 20070 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTC 8085 || || || |||||||| || || || || Sbjct 20069 CGGTTACCCTGGTCGTTGGCGATGATATC 20041 >seq1076 Length=4255 Score = 123 bits (136), Expect = 3e-23 Identities = 529/824 (64%), Gaps = 39/824 (5%) Strand=Plus/Minus Query 105319 ATCGTACCAACGTGTTTATGGTTCGACTTTTCATTACACGCGTCTTTGTAAAGCATATAT 105378 || ||||| | || || ||||| ||| || || || || ||||| ||||| || Sbjct 2017 ATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAT 1958 Query 105379 GGGGTTCCCGTTTCACTTTGGGATTTAATAATTGCTTTCCAAATCTCCGAAGC-----TG 105433 ||| |||| || ||| | |||| | || ||| || | ||||| || | ||| || Sbjct 1957 GGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTGATG 1898 Query 105434 GTACAACTTTAG----TTGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTTCAAAC 105489 || ||| | |||| | ||||| ||||| || ||||| ||| | || ||| Sbjct 1897 GT----CTTGCGACCCTTGCCCT-CCTTC----TCGTACTTTTCGTACAGAGCCTCGAAC 1847 Query 105490 TCTTTACCGTACACGTCTGAAAGACCCTTTGCCTGATCAGGACAAAACAATGACCAATTA 105549 || | ||||| ||| | || || || | || || | || || ||| | | Sbjct 1846 TCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCA 1787 Query 105550 CCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGC--TGAAAAGAGGT 105607 || | |||||| ||||||||||| | ||| || ||||| | ||| ||||||| | Sbjct 1786 CCGTTCTTTTCAACACGTTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAAAGA--T 1729 Query 105608 CTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATAT 105667 | || | |||| || | ||| || ||| ||| | || || ||||||| | || Sbjct 1728 CACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAAATCGAAGACAT 1669 Query 105668 CGGCGTGCCATGGTTCTAAATAGACTGCAATAG-ACC------CTTTACGACGCCCCGCT 105720 | | |||||| || || | |||| |||| || ||| ||| | ||| | | Sbjct 1668 CAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTT---GTTGCCAC-CC 1613 Query 105721 TGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGAT 105780 || | |||||| | || || ||| | || || | ||| |||| |||||||| ||| Sbjct 1612 TGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAATACCATTCGAT 1553 Query 105781 GTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCA 105840 || || || || || || | ||| | | ||||| | | ||| || | || ||| Sbjct 1552 GTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGCACATTTAGACCA 1493 Query 105841 ATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCG 105900 ||||| |||||| ||| ||| ||||| || | |||||||| || || || Sbjct 1492 ATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCA 1433 Query 105901 ATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTG-GGTGTACC 105959 ||||| || ||||| | ||| || ||| || ||||| | ||| || ||| || || || Sbjct 1432 ATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGATAATTG-GGGCTGAGGAGTGCC 1374 Query 105960 AGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTT--TCGATAACGCTTCGTAT 106017 |||||||| || || || | ||||| |||| || ||| | || | | | |||| Sbjct 1373 GGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAA--CTTGCTAGACATCAGATTGTAT 1316 Query 106018 GTTTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAGAGA 106077 || |||| ||| | || ||||| | || ||||||| || || ||||| | Sbjct 1315 GTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAGACACACGCATGATCATG 1256 Query 106078 TATTGGGGTGTTTCAATAATTTCACCGTCAATTTTCTGGAGATA 106121 | || || || | ||| | |||||||||||| |||| || Sbjct 1255 TGCTGAGGGCGCTCGACAATCTTACCGTCAATTTTGAGGAGGTA 1212 >seq843 Length=80993 Score = 93.3 bits (102), Expect = 5e-14 Identities = 169/244 (69%), Gaps = 5/244 (2%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | || || || || ||||| || ||| || |||||||| Sbjct 68857 ATCGAAATCCTCACCACCGAGATGGGTGTCACCAGCGGTAGCCAGGACCTCGAAGATACC 68798 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | |||||| | | || ||||| || ||||||||||| || || | || | Sbjct 68797 GTCATCAATGGAGAGAAGGGAGACATCGAAGGTACCACCACCGAGATCGTA---GACGAT 68741 Query 7576 GTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 | || | ||| || | | | |||| || |||||||| |||||||| || || || || | Sbjct 68740 GATC-TGTCGCTCACCGTCGGTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTGGGCT 68682 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | || | || || ||| ||| || || ||||| | | ||||| || || || |||| Sbjct 68681 CGTTGACGATTCGGAGAACGTTGAGACCGGCAATGATACCGGCATCCTTGGTGGCCTGTC 68622 Query 7695 GTTG 7698 | || Sbjct 68621 GCTG 68618 Score = 86.0 bits (94), Expect = 8e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763 |||| |||||||| ||||| || ||||| |||| ||||| ||||||||||| || | Sbjct 68559 CGTTGAAGTAGGCAGGGACGGTAACGACGGCGTGGGTGACCTTCTTACCGAGGTAGCCCT 68500 Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823 | |||| || ||||| ||| ||||||||| | || ||||| |||| | ||||| | Sbjct 68499 CAGCGACCTCCTTCATCTTGCCAAGAACCATAGCAGAGATCTCCTCAGGAGTGAACTGCT 68440 Query 7824 TC 7825 || Sbjct 68439 TC 68438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635113738076840