Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1076 219 5e-52
seq179 131 2e-25
seq596 104 3e-17
seq599 91.5 2e-13
>seq1076
Length=4255
Score = 219 bits (242), Expect = 5e-52
Identities = 1140/1783 (64%), Gaps = 57/1783 (3%)
Strand=Plus/Minus
Query 105551 TCAAGACTGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTC 105610
|||| | |||||||||| || || |||| | || || |||||||| ||||||
Sbjct 3010 TCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTC 2951
Query 105611 TTGAGTCCTTGTTTCCACGCGTACATA-TGCATAGAAGAGAGCTTGGACATCGTTGGACT 105669
||||| || | ||||| || | || | |||||| | || |||| |||||| ||
Sbjct 2950 TTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATACTGGTGATCTTGCCCATCGTGGGGTC 2892
Query 105670 TTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCC 105727
| |||| || |||| ||| |||| | ||||||||| ||| || | || |||
Sbjct 2891 CTTCATGTGAATGTTCAGTGACTGGGACT--GATCAATGAAGGCACCTCGATCAGCAGCC 2834
Query 105728 ATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCA 105787
|| | || ||| | | ||| ||||| || || ||| ||| ||||| |||
Sbjct 2833 ATCTGAACGACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAGCCTTGACATCG 2774
Query 105788 TCTGGGATATCTGAGATATTTTGAATTGAACC---CCCCGCCTTGACCATGAGATCCTTC 105844
| ||||| | | || || ||||| ||||| | | || ||| || | | ||||
Sbjct 2773 GCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGA---TGCGGTTCTTC 2717
Query 105845 ATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATC 105904
||| | | |||||| ||||| || | || || |||| || |||||||| |
Sbjct 2716 ATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACC 2657
Query 105905 ACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCAT 105964
||||| || ||||| | | | ||||| || | |||||||| || |||||
Sbjct 2656 TGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCAC 2597
Query 105965 TCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTG 106024
|| || || ||||| || || | ||| ||| || ||||| || || | | ||||||
Sbjct 2596 TCGTTGTTGCCCAAAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCGAGGAGCAGACTG 2537
Query 106025 TTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA---TCCCAGTCGTAGTTG--A 106079
||||| | || | | ||||| ||||| ||| | |||||||| || | |
Sbjct 2536 TTACGGATGCCGTGTGTCTTGAC---TTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCA 2480
Query 106080 GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCT 106139
| || || || |||| |||| ||||| || || | || | || | ||| |||||||
Sbjct 2479 GAG-GGCTTGACGTTCC-ACATGTCAAACTGGAGGATACCCTCAGAGGCGGGGGAACCCT 2422
Query 106140 CAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCG 106198
|| || |||| ||| | | | ||||| | ||| | || |||| |||
Sbjct 2421 TGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAG-GCAGTGAGGGCAGCG 2363
Query 106199 TGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCG 106258
||||| ||||| |||||||| | || | ||| || || ||| || || | |
Sbjct 2362 TGATAGATGGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGG-G 2304
Query 106259 TAGCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTG 106317
| ||| | || || |||| || || || |||||||| | |||||| |||| |||
Sbjct 2303 CATACGCAGAGCAAGGAAAGCATCAGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTG 2244
Query 106318 TCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTT 106377
||||| ||| || || || || || || || || || |||| |||
Sbjct 2243 GCGCATGTTACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTT 2184
Query 106378 TAGATTTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCATAATCAAAAGTGCGAG 106436
|| || |||||| || ||| | ||| || || || | | || | || ||
Sbjct 2183 CAGGTTGCGAATAACAACCTGACTGACCTTATGCAACTTCTTGA-AGTCGTA---GCAAG 2128
Query 106437 TCTCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCT 106493
|| || | ||| | || || | | || || | ||||| ||||| ||
Sbjct 2127 CTTCATCGTAGTTGATGAAGGAGGGCAGAGACAGAGAGGCAAGGTTGCAGACAGCGACCT 2068
Query 106494 CATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCA 106553
| || | |||||| | |||||| || || | |||||| || || || || |
Sbjct 2067 CGTCAGGGGCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCGA 2008
Query 106554 AATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCG 106613
||||||||||| ||||| |||||| |||||||||||||||||| | || | || |
Sbjct 2007 GGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGG 1948
Query 106614 TCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTG 106672
|||| ||||| | || ||||| || | ||| | | || | | || | |||| |||
Sbjct 1947 TCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTG----ATGGTCTTG 1892
Query 106673 -GCCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCG 106729
| || | |||||| |||||||||| ||| || || || |||||||| || |
Sbjct 1891 CGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAG 1832
Query 106730 TCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACC 106789
|||| ||| || || || || || || | || | ||| | ||| || |||||
Sbjct 1831 TCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACA 1772
Query 106790 CGCTTCATGAAAAGGTCTGGAATCCACAGGG-ATGAAAAGAGATCTC-TACACCGAGCCT 106847
|| ||||||||||| || || ||||| |||| | | ||| ||||| | ||| || |||
Sbjct 1771 CGTTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAA-AGATCACGGGCACGGA-CCT 1714
Query 106848 CTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT 106907
| || | ||| ||||| || | || ||||| || | || ||| | |||||| ||||
Sbjct 1713 CCTCCTTACCGTGGTTCTTACGGAGATCCAGGAAATCGAAGACATCAGAGTGCCAAGGCT 1654
Query 106908 CAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTG 106964
| || |||| || | || || ||| ||| | || | ||||| || || |
Sbjct 1653 CGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAG 1594
Query 106965 TGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA 107023
|| ||| || || |||||||| |||| |||||||| ||| ||| || || || |||
Sbjct 1593 TGTTGTTGAAGACACGAAGCATAGGAACAATACCATTCGATGTACCGTTGGTACCGGCGA 1534
Query 107024 -ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTT 107082
|| ||| | | || | | | || | | | |||||||| |||||| |||
Sbjct 1533 TGTATGAG--CCAGTAGCACGAATACGGTGCACATTTAGACCAATACCACCAGCCATCTT 1476
Query 107083 TGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTT 107142
||||| ||||| | | ||||| | ||||| || | || ||| ||||| |
Sbjct 1475 GGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCAT 1416
Query 107143 GGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGG 107202
| | | ||||||| || | || || || || || ||||||||||| || ||
Sbjct 1415 ATCAACCAAGAAGCAAGATGATAATTGGGGCTGAGGAGTGCCGGCATTGAAGAGCGTGGG 1356
Query 107203 TGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCA 107260
| || || ||| | | |||| |||||| | ||||||||||||||| ||
Sbjct 1355 GGAAGCATGCGTGA--AGAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCG 1298
Query 107261 ATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303
|| || || || ||| || | | ||||||||| | |||||
Sbjct 1297 ATATCATCACCCCAGATACCAACAGACACACGCATGATCATGT 1255
>seq179
Length=39909
Score = 131 bits (144), Expect = 2e-25
Identities = 334/503 (66%), Gaps = 18/503 (4%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| |||| |||||||| |||||||||||||| || ||||| ||||| |||||
Sbjct 35166 TAGTCAGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 35225
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100
||||| || || || | || || | | | | || |||| ||||
Sbjct 35226 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGGA 35280
Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160
||||||| | || |||||||||||| ||| ||||||||||| |||| |||
Sbjct 35281 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGG 35340
Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220
||| || || || || || |||| | | |||||| || || || | | |||
Sbjct 35341 CACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATAT 35400
Query 117221 CGTGGATAGTTTCGGTAGTGGGTCTA---TTACGCAAAGTCTTGAAGAGCTCCACGGCAA 117277
| ||||| | | || ||| | | || | || | || ||| || |||||
Sbjct 35401 CCTGGATCATCTGCTTACTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCAA 35457
Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337
| || ||| |||||||| || || || || || || || |||||| || || ||||
Sbjct 35458 AGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCA 35517
Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCT 117397
||||||| |||||||| | ||| | |||| | ||| | || ||||||||||||||
Sbjct 35518 TGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCGCCACTGAAGAAGATACCCT 35577
Query 117398 CCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCAT 117456
| ||| ||||| |||| || |||| ||| |||||| ||| | || | | | ||||
Sbjct 35578 CAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAG-GAGTCCTTATCCTGGATCCAT 35636
Query 117457 TTCATTGCCCATTTCGCCTTCTT 117479
|| ||||| | ||||||||
Sbjct 35637 CGGATGGCCCAGTCAGCCTTCTT 35659
>seq596
Length=62605
Score = 104 bits (114), Expect = 3e-17
Identities = 225/332 (68%), Gaps = 10/332 (3%)
Strand=Plus/Minus
Query 9365 TCCCACGGCATCAATCTCATCAATGAAGACAATA-CATGG---TTGATTTTCGCGGGCGA 9420
||| | |||||||| ||| || ||||| ||||| || || ||| |||| || | |
Sbjct 9807 TCCAATGGCATCAAGCTCGTCGATGAAAACAATGGCAGGGGACTTGCTTTTGGCCGCAGT 9748
Query 9421 TTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9480
||||| || || || | ||||| || ||||||||||| ||||| |||| | |
Sbjct 9747 G----AAGAGGTCACGGACTCGCTTGGCACCAACACCAACAAAGATCTCGTCAAA-CTCG 9693
Query 9481 CGGCGGAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9539
| | |||| | || ||||||||| || ||| || |||| ||||| || |||||
Sbjct 9692 CTACCAGACATGTAGAAAAAGGGGACACCAGCTTCGCCAGCAACAGCTCGAGCAAGAAGC 9633
Query 9540 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACTT 9599
|||||||| ||||| || ||| | |||||| ||||| || | || || |||
Sbjct 9632 GTCTTACCAGTACCAGGAGGACCGACCAGGAGGACACCCTTGGGCAGTTTAGCACCAAGA 9573
Query 9600 CCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCG 9659
| | | | || || | ||| ||||| || |||| |||| | || ||||||||
Sbjct 9572 TCGCTGAACTTTTCGGGATTCTTCAGAAACTCGACAACTTCTTGGAGCTCCTCTTTGGCT 9513
Query 9660 GCGTCAATCCCCTCAACATCGGTAAACCGGGT 9691
||||| || | ||||||| | ||||| ||
Sbjct 9512 TCGTCACAACCATGAACATCGTTGAACCGAGT 9481
>seq599
Length=95380
Score = 91.5 bits (100), Expect = 2e-13
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 155045 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 155104
|||| || |||| || ||||| ||||| ||| |||||| ||| | || || |
Sbjct 24121 ATGGACGCATTGCCCCTCGATCAGGTCTGGCTTCTAAGCATTTCATTGACACAGGCGCTG 24180
Query 155105 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 155164
|||| || ||| |||| || ||| ||||||| ||| | |||||||| || ||
Sbjct 24181 GTGTCATCGATGCCGATTACCGTGGTCAAGTCAAGGTCCTGCTCTTCAACCATAACGAAT 24240
Query 155165 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 155217
||||||||||| ||| |||| || ||||| || |||||||| || ||||||
Sbjct 24241 CCGACTTTGAGGTGAAGGAAGGCGACCGCATTGCTCAACTTGTTCTAGAGCGC 24293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589963093201240
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