Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016- 06-02] 2,401 sequences; 41,308,709 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1076 219 5e-52 seq179 131 2e-25 seq596 104 3e-17 seq599 91.5 2e-13 >seq1076 Length=4255 Score = 219 bits (242), Expect = 5e-52 Identities = 1140/1783 (64%), Gaps = 57/1783 (3%) Strand=Plus/Minus Query 105551 TCAAGACTGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTC 105610 |||| | |||||||||| || || |||| | || || |||||||| |||||| Sbjct 3010 TCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTC 2951 Query 105611 TTGAGTCCTTGTTTCCACGCGTACATA-TGCATAGAAGAGAGCTTGGACATCGTTGGACT 105669 ||||| || | ||||| || | || | |||||| | || |||| |||||| || Sbjct 2950 TTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATACTGGTGATCTTGCCCATCGTGGGGTC 2892 Query 105670 TTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCC 105727 | |||| || |||| ||| |||| | ||||||||| ||| || | || ||| Sbjct 2891 CTTCATGTGAATGTTCAGTGACTGGGACT--GATCAATGAAGGCACCTCGATCAGCAGCC 2834 Query 105728 ATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCA 105787 || | || ||| | | ||| ||||| || || ||| ||| ||||| ||| Sbjct 2833 ATCTGAACGACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAGCCTTGACATCG 2774 Query 105788 TCTGGGATATCTGAGATATTTTGAATTGAACC---CCCCGCCTTGACCATGAGATCCTTC 105844 | ||||| | | || || ||||| ||||| | | || ||| || | | |||| Sbjct 2773 GCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGA---TGCGGTTCTTC 2717 Query 105845 ATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATC 105904 ||| | | |||||| ||||| || | || || |||| || |||||||| | Sbjct 2716 ATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACC 2657 Query 105905 ACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCAT 105964 ||||| || ||||| | | | ||||| || | |||||||| || ||||| Sbjct 2656 TGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCAC 2597 Query 105965 TCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTG 106024 || || || ||||| || || | ||| ||| || ||||| || || | | |||||| Sbjct 2596 TCGTTGTTGCCCAAAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCGAGGAGCAGACTG 2537 Query 106025 TTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA---TCCCAGTCGTAGTTG--A 106079 ||||| | || | | ||||| ||||| ||| | |||||||| || | | Sbjct 2536 TTACGGATGCCGTGTGTCTTGAC---TTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCA 2480 Query 106080 GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCT 106139 | || || || |||| |||| ||||| || || | || | || | ||| ||||||| Sbjct 2479 GAG-GGCTTGACGTTCC-ACATGTCAAACTGGAGGATACCCTCAGAGGCGGGGGAACCCT 2422 Query 106140 CAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCG 106198 || || |||| ||| | | | ||||| | ||| | || |||| ||| Sbjct 2421 TGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAG-GCAGTGAGGGCAGCG 2363 Query 106199 TGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCG 106258 ||||| ||||| |||||||| | || | ||| || || ||| || || | | Sbjct 2362 TGATAGATGGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGG-G 2304 Query 106259 TAGCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTG 106317 | ||| | || || |||| || || || |||||||| | |||||| |||| ||| Sbjct 2303 CATACGCAGAGCAAGGAAAGCATCAGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTG 2244 Query 106318 TCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTT 106377 ||||| ||| || || || || || || || || || |||| ||| Sbjct 2243 GCGCATGTTACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTT 2184 Query 106378 TAGATTTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCATAATCAAAAGTGCGAG 106436 || || |||||| || ||| | ||| || || || | | || | || || Sbjct 2183 CAGGTTGCGAATAACAACCTGACTGACCTTATGCAACTTCTTGA-AGTCGTA---GCAAG 2128 Query 106437 TCTCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCT 106493 || || | ||| | || || | | || || | ||||| ||||| || Sbjct 2127 CTTCATCGTAGTTGATGAAGGAGGGCAGAGACAGAGAGGCAAGGTTGCAGACAGCGACCT 2068 Query 106494 CATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCA 106553 | || | |||||| | |||||| || || | |||||| || || || || | Sbjct 2067 CGTCAGGGGCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCGA 2008 Query 106554 AATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCG 106613 ||||||||||| ||||| |||||| |||||||||||||||||| | || | || | Sbjct 2007 GGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGG 1948 Query 106614 TCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTG 106672 |||| ||||| | || ||||| || | ||| | | || | | || | |||| ||| Sbjct 1947 TCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTG----ATGGTCTTG 1892 Query 106673 -GCCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCG 106729 | || | |||||| |||||||||| ||| || || || |||||||| || | Sbjct 1891 CGACCCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAG 1832 Query 106730 TCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACC 106789 |||| ||| || || || || || || | || | ||| | ||| || ||||| Sbjct 1831 TCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACA 1772 Query 106790 CGCTTCATGAAAAGGTCTGGAATCCACAGGG-ATGAAAAGAGATCTC-TACACCGAGCCT 106847 || ||||||||||| || || ||||| |||| | | ||| ||||| | ||| || ||| Sbjct 1771 CGTTTCATGAAAAGATCAGGGATCCAAAGGGCAAGGAAA-AGATCACGGGCACGGA-CCT 1714 Query 106848 CTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT 106907 | || | ||| ||||| || | || ||||| || | || ||| | |||||| |||| Sbjct 1713 CCTCCTTACCGTGGTTCTTACGGAGATCCAGGAAATCGAAGACATCAGAGTGCCAAGGCT 1654 Query 106908 CAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTG 106964 | || |||| || | || || ||| ||| | || | ||||| || || | Sbjct 1653 CGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAG 1594 Query 106965 TGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA 107023 || ||| || || |||||||| |||| |||||||| ||| ||| || || || ||| Sbjct 1593 TGTTGTTGAAGACACGAAGCATAGGAACAATACCATTCGATGTACCGTTGGTACCGGCGA 1534 Query 107024 -ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTT 107082 || ||| | | || | | | || | | | |||||||| |||||| ||| Sbjct 1533 TGTATGAG--CCAGTAGCACGAATACGGTGCACATTTAGACCAATACCACCAGCCATCTT 1476 Query 107083 TGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTT 107142 ||||| ||||| | | ||||| | ||||| || | || ||| ||||| | Sbjct 1475 GGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCAT 1416 Query 107143 GGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGG 107202 | | | ||||||| || | || || || || || ||||||||||| || || Sbjct 1415 ATCAACCAAGAAGCAAGATGATAATTGGGGCTGAGGAGTGCCGGCATTGAAGAGCGTGGG 1356 Query 107203 TGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCA 107260 | || || ||| | | |||| |||||| | ||||||||||||||| || Sbjct 1355 GGAAGCATGCGTGA--AGAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCG 1298 Query 107261 ATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 || || || || ||| || | | ||||||||| | ||||| Sbjct 1297 ATATCATCACCCCAGATACCAACAGACACACGCATGATCATGT 1255 >seq179 Length=39909 Score = 131 bits (144), Expect = 2e-25 Identities = 334/503 (66%), Gaps = 18/503 (4%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| |||| |||||||| |||||||||||||| || ||||| ||||| ||||| Sbjct 35166 TAGTCAGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 35225 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100 ||||| || || || | || || | | | | || |||| |||| Sbjct 35226 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCAAGAGCGACAAGGA 35280 Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160 ||||||| | || |||||||||||| ||| ||||||||||| |||| ||| Sbjct 35281 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGG 35340 Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220 ||| || || || || || |||| | | |||||| || || || | | ||| Sbjct 35341 CACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATAT 35400 Query 117221 CGTGGATAGTTTCGGTAGTGGGTCTA---TTACGCAAAGTCTTGAAGAGCTCCACGGCAA 117277 | ||||| | | || ||| | | || | || | || ||| || ||||| Sbjct 35401 CCTGGATCATCTGCTTACTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCAA 35457 Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337 | || ||| |||||||| || || || || || || || |||||| || || |||| Sbjct 35458 AGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCA 35517 Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCT 117397 ||||||| |||||||| | ||| | |||| | ||| | || |||||||||||||| Sbjct 35518 TGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCGCCACTGAAGAAGATACCCT 35577 Query 117398 CCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCAT 117456 | ||| ||||| |||| || |||| ||| |||||| ||| | || | | | |||| Sbjct 35578 CAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAG-GAGTCCTTATCCTGGATCCAT 35636 Query 117457 TTCATTGCCCATTTCGCCTTCTT 117479 || ||||| | |||||||| Sbjct 35637 CGGATGGCCCAGTCAGCCTTCTT 35659 >seq596 Length=62605 Score = 104 bits (114), Expect = 3e-17 Identities = 225/332 (68%), Gaps = 10/332 (3%) Strand=Plus/Minus Query 9365 TCCCACGGCATCAATCTCATCAATGAAGACAATA-CATGG---TTGATTTTCGCGGGCGA 9420 ||| | |||||||| ||| || ||||| ||||| || || ||| |||| || | | Sbjct 9807 TCCAATGGCATCAAGCTCGTCGATGAAAACAATGGCAGGGGACTTGCTTTTGGCCGCAGT 9748 Query 9421 TTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9480 ||||| || || || | ||||| || ||||||||||| ||||| |||| | | Sbjct 9747 G----AAGAGGTCACGGACTCGCTTGGCACCAACACCAACAAAGATCTCGTCAAA-CTCG 9693 Query 9481 CGGCGGAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9539 | | |||| | || ||||||||| || ||| || |||| ||||| || ||||| Sbjct 9692 CTACCAGACATGTAGAAAAAGGGGACACCAGCTTCGCCAGCAACAGCTCGAGCAAGAAGC 9633 Query 9540 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACTT 9599 |||||||| ||||| || ||| | |||||| ||||| || | || || ||| Sbjct 9632 GTCTTACCAGTACCAGGAGGACCGACCAGGAGGACACCCTTGGGCAGTTTAGCACCAAGA 9573 Query 9600 CCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCG 9659 | | | | || || | ||| ||||| || |||| |||| | || |||||||| Sbjct 9572 TCGCTGAACTTTTCGGGATTCTTCAGAAACTCGACAACTTCTTGGAGCTCCTCTTTGGCT 9513 Query 9660 GCGTCAATCCCCTCAACATCGGTAAACCGGGT 9691 ||||| || | ||||||| | ||||| || Sbjct 9512 TCGTCACAACCATGAACATCGTTGAACCGAGT 9481 >seq599 Length=95380 Score = 91.5 bits (100), Expect = 2e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 155045 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 155104 |||| || |||| || ||||| ||||| ||| |||||| ||| | || || | Sbjct 24121 ATGGACGCATTGCCCCTCGATCAGGTCTGGCTTCTAAGCATTTCATTGACACAGGCGCTG 24180 Query 155105 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 155164 |||| || ||| |||| || ||| ||||||| ||| | |||||||| || || Sbjct 24181 GTGTCATCGATGCCGATTACCGTGGTCAAGTCAAGGTCCTGCTCTTCAACCATAACGAAT 24240 Query 155165 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 155217 ||||||||||| ||| |||| || ||||| || |||||||| || |||||| Sbjct 24241 CCGACTTTGAGGTGAAGGAAGGCGACCGCATTGCTCAACTTGTTCTAGAGCGC 24293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589963093201240