Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016- 06-02] 2,401 sequences; 41,308,709 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1021 118 1e-21 >seq1021 Length=26796 Score = 118 bits (130), Expect = 1e-21 Identities = 322/485 (66%), Gaps = 15/485 (3%) Strand=Plus/Plus Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 159361 || || ||| | || | |||||||||| || || || | || ||| | || |||| Sbjct 2112 CAGCCCAACTCTGGTGCTCAGGGTGAGTTCGCTGGTCT--TCGCTGTATCAAGGCTTACC 2169 Query 159362 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 159420 | | ||| || || | ||||| |||| || ||| | || || | || || || || Sbjct 2170 A-CGAGGCTCGTGATGGAGATAAGCGAAAGGTCTGTCTTATCCCTGTTTCTGCTCACGGT 2228 Query 159421 ACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG-- 159478 || || ||||| || || | ||||| || ||||| ||||| ||| |||||||| | Sbjct 2229 ACCAACCCTGCTTCTGCTGCCATGGCTGGTATGAAGGTTGTTACTGTGAAGTGTGACGGC 2288 Query 159479 ATGA-TGGCAACATAGACATCAAAGATCTAGAG---AAGAAAGCAATCATGAATACATTT 159534 | || ||| ||| | || ||| | ||||| || ||| || || | | | | Sbjct 2289 AAGACTGGTAACCTGGATATCGAGGATCTCAAGGCCAAGTGTGC---CAAGCACGCTGAT 2345 Query 159535 GAACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATC 159594 || || | ||| ||| |||| ||||| ||||| ||||| || || | | || Sbjct 2346 GAGCTTGCTGCTATCATGGTTACTTATCCCTCTACTTTCGGTGTCTTCGAGCCTGAGATT 2405 Query 159595 AGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAAT 159654 | || | ||| | |||| || ||| |||| || | || || | || ||||| || Sbjct 2406 AAGCAAGTCTGTGATCTTGTCCACGAGCATGGCGGCCTTGTCTACATGGACGGTGCCAAC 2465 Query 159655 CTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTA 159714 | || || ||| | ||||| | || ||||| |||||| ||||| |||||||| Sbjct 2466 ATGAACGCTCAGATTGGTCTCTGCAGCCCTGGTGACATTGGTGCTGATGTCTGTCATCTC 2525 Query 159715 AACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATT 159774 ||| | || ||||| ||||||||||| || || ||||| ||||| || || || || || Sbjct 2526 AACCTCCACAAGACCTTCTGTATTCCCCACGGCGGTGGTGGTCCCGGTGTTGGCCCCATC 2585 Query 159775 GGTGT 159779 | ||| Sbjct 2586 GCTGT 2590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588033551113360