Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq1021 118 1e-21
>seq1021
Length=26796
Score = 118 bits (130), Expect = 1e-21
Identities = 322/485 (66%), Gaps = 15/485 (3%)
Strand=Plus/Plus
Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 159361
|| || ||| | || | |||||||||| || || || | || ||| | || ||||
Sbjct 2112 CAGCCCAACTCTGGTGCTCAGGGTGAGTTCGCTGGTCT--TCGCTGTATCAAGGCTTACC 2169
Query 159362 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 159420
| | ||| || || | ||||| |||| || ||| | || || | || || || ||
Sbjct 2170 A-CGAGGCTCGTGATGGAGATAAGCGAAAGGTCTGTCTTATCCCTGTTTCTGCTCACGGT 2228
Query 159421 ACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG-- 159478
|| || ||||| || || | ||||| || ||||| ||||| ||| |||||||| |
Sbjct 2229 ACCAACCCTGCTTCTGCTGCCATGGCTGGTATGAAGGTTGTTACTGTGAAGTGTGACGGC 2288
Query 159479 ATGA-TGGCAACATAGACATCAAAGATCTAGAG---AAGAAAGCAATCATGAATACATTT 159534
| || ||| ||| | || ||| | ||||| || ||| || || | | | |
Sbjct 2289 AAGACTGGTAACCTGGATATCGAGGATCTCAAGGCCAAGTGTGC---CAAGCACGCTGAT 2345
Query 159535 GAACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATC 159594
|| || | ||| ||| |||| ||||| ||||| ||||| || || | | ||
Sbjct 2346 GAGCTTGCTGCTATCATGGTTACTTATCCCTCTACTTTCGGTGTCTTCGAGCCTGAGATT 2405
Query 159595 AGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAAT 159654
| || | ||| | |||| || ||| |||| || | || || | || ||||| ||
Sbjct 2406 AAGCAAGTCTGTGATCTTGTCCACGAGCATGGCGGCCTTGTCTACATGGACGGTGCCAAC 2465
Query 159655 CTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTA 159714
| || || ||| | ||||| | || ||||| |||||| ||||| ||||||||
Sbjct 2466 ATGAACGCTCAGATTGGTCTCTGCAGCCCTGGTGACATTGGTGCTGATGTCTGTCATCTC 2525
Query 159715 AACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATT 159774
||| | || ||||| ||||||||||| || || ||||| ||||| || || || || ||
Sbjct 2526 AACCTCCACAAGACCTTCTGTATTCCCCACGGCGGTGGTGGTCCCGGTGTTGGCCCCATC 2585
Query 159775 GGTGT 159779
| |||
Sbjct 2586 GCTGT 2590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588033551113360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |