Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq1076 352 5e-92
seq179 199 7e-46
>seq1076
Length=4255
Score = 352 bits (390), Expect = 5e-92
Identities = 1153/1763 (65%), Gaps = 94/1763 (5%)
Strand=Plus/Minus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | ||| |||||||||||| || || || |||||||||||||||||
Sbjct 3007 ACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTCTTG 2948
Query 212613 AGGCC---CTTGCCCCAGCCGTGCAT-GTGCATTGCTGTGAGTTTCTTCAGCTTAATATT 212668
||||| ||| |||||| |||| |||||| |||| |||| | || |
Sbjct 2947 AGGCCAAGCTT---CCAGCC-TGCAAAGTGCATACTGGTGA---TCTTGCCC---ATCGT 2898
Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728
|||| | || || || | |||||| ||||| ||| || ||||| | |
Sbjct 2897 GGGGTCCT--TCATG-------TGAATGTTCAGTGACTGGGACTGATCAATGAAGGCACC 2847
Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788
| ||||| ||||| | | || | | ||| |||| |||||| || |||||| | |
Sbjct 2846 TCGATCAGCAGCCATCTGAACGACCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAG 2787
Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAG 212848
| |||| || | |||| | ||| |||||||| | || || || ||||
Sbjct 2786 AGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGAATGGAACC-------ATTCTCAG 2734
Query 212849 C--TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACC 212900
| || | ||| ||| | ||| ||| || ||| || | ||| ||||| |
Sbjct 2733 CAATG-ATGCGGTTCTTCATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGC 2675
Query 212901 AGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAA 212960
|| |||||||| | |||||| ||||| | ||| || | | ||||| | || ||
Sbjct 2674 AGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGGCGTTGGTAGATATTGGAG 2615
Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020
||||||||||||| || ||||||||| |||| |||||| | || ||||| || |||||
Sbjct 2614 GTGTAGGGCTCGAAGCACTCGTTGTTGCCCAAAATCTGGGAGGTACTGGCAGTAGGCATA 2555
Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGC---CGAAGC-TC 213076
||||| | || |||||||| | | ||||| | | ||| | ||||| ||
Sbjct 2554 GGAGCGAGGAGCAGACTGTTACGGATGCCGTGT--GTCT-TGACTTCCTCTCGAAGAGTC 2498
Query 213077 TGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAA 213136
| |||||||||| | |||| | ||| |||||||||||||||||||| |
Sbjct 2497 T-CCCAGTCCCAGAGGTCAGAGGG---------CTTGACGTTCCACATGTCAAACTGGAG 2448
Query 213137 GATGCCTTTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGG 213192
||| || |||| ||||| |||| | | | ||||||||| || | |||||| |
Sbjct 2447 GATACC----CTCAGAGGCGGGGGAACCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTAG 2392
Query 213193 CCAGCTCGCA-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251
|||||| ||| ||| || |||||||||| |||||||| ||||| |||| | |||||
Sbjct 2391 CCAGCT-GCACGGAGGCAGTGAGGGCAGCGTGATAGATGGTCTCAAAGATCTGCTTGTTG 2333
Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311
|||| ||||| || ||| ||||||||| || |||| ||||||| ||
Sbjct 2332 AGCTCACGAGCCTCGGGTGACTCGAAGGGCATACGCAGAGCAAGGAAAGCATCAGCAAGG 2273
Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370
||||| || || | || ||||||| ||| | || |||| ||| |||| ||||| |
Sbjct 2272 CCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGC-CTCCTGGAC 2214
Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430
||||| ||| |||||||||||||| |||||||| | | || | |||| |
Sbjct 2213 AGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTT 2154
Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGC------CCCCGTCCTGCACAAACTCAGGCAG 213484
|| || | ||||| |||||| | ||| | | || |||||
Sbjct 2153 ATGCA---AC---TTCTTGAAGTCGTAGCAAGCTTCATCGTAGTTGATGAAGGAGGGCAG 2100
Query 213485 GGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTC 213544
| | ||| |||||||| || || ||||| | || | | |||||| || || ||
Sbjct 2099 AGACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAGTACTCGATAATTTC 2040
Query 213545 GGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGC 213604
||||| |||||| || ||||||||| || ||||||| ||| ||| ||||| | ||
Sbjct 2039 AGTGCAAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGG-TTGCTCTTGCGGTTGC 1981
Query 213605 A-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC 213663
| | |||||||||||||||| | ||| |||||||| ||||| | | || || |
Sbjct 1980 AGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGT 1921
Query 213664 TCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTT 213723
||| || | | ||||||| | | ||| | | | | |||||||| ||
Sbjct 1920 ACCAAAGCTTCTGAGCCTTGATGGTCTTGC-GACCCTTGCCCTCCT--TCTCGTACTTTT 1864
Query 213724 CGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGAC 213783
|||| || | | ||| || | || || | | || || || || ||| |
Sbjct 1863 CGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGC 1804
Query 213784 ACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACA 213843
|||| || ||||||| |||| | | || | | |||||| || || |||| ||| |
Sbjct 1803 ACATCAGTGTCCAGTCACCGTTCTTTTCAACACGTTTCATGAAAAGATCAGGGATCCAAA 1744
Query 213844 GCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTA 213903
| || ||| || || | || | ||| ||| || ||| || || ||||| |
Sbjct 1743 GGGCAAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCA 1684
Query 213904 GAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCC 213960
| || || |||| || | |||||| ||||| | |||||||||||| || || | ||
Sbjct 1683 GGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCT 1624
Query 213961 TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCA 214020
| ||||| |||||||| || || || ||||||||| || || | || || |
Sbjct 1623 TGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAA 1564
Query 214021 GCCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTTGC 214077
|| || || ||| |||||||| || || || || ||||| | || | | | |||
Sbjct 1563 TACCATTCGA-TGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCACGAATACGGTGC 1505
Query 214078 TCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCT 214137
||| ||| || || ||||| || ||||||||||||||| ||| | | | ||| |
Sbjct 1504 ACATTTAGA--CCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTAT 1447
Query 214138 CCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGG 214197
| ||| || | || ||||| || | | | | ||||||||| || | ||||
Sbjct 1446 CGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGATAATTGGG 1387
Query 214198 GCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGA 214257
|| | | ||| | ||||| ||||||||| ||||| | | |||||| |||| |
Sbjct 1386 GCTGAGGAGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACA 1327
Query 214258 GGAGCCTGTAGGTCTCCAGGACT 214280
|| |||| ||||||| ||||
Sbjct 1326 TCAGATTGTATGTCTCCAAGACT 1304
>seq179
Length=39909
Score = 199 bits (220), Expect = 7e-46
Identities = 488/733 (67%), Gaps = 19/733 (3%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| | || | ||||| |||||||| ||||| || | | |||||||||||
Sbjct 35162 CTGGTAGTCAGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 35221
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCA-GCA 47957
||||||| ||||||||||| | || || ||| | || ||| | || | |
Sbjct 35222 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCT-TCTCGTTGCCAAGAGCGACAAGGA 35280
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| |||| |||||| |||| ||||| | ||||||| ||||||||| | |||||
Sbjct 35281 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGG 35340
Query 48018 ACACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
||| || || ||| | ||||| ||||||| ||| || ||||| || | ||
Sbjct 35341 -CACAGGGAAGAGCTTCGGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATA 35399
Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTG------GCATAGAGCATG 48130
| || ||| || | || | || | | |||| | | ||| | |
Sbjct 35400 TCCT-------GGA-TCATCTGCTTACTGGCAC-GACCCTTGAGGTGAGAGTGGAGGAGG 35450
Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190
||||||||||| |||| | || ||||| || ||||||| ||||||||||| |||
Sbjct 35451 CAGGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 35510
Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250
|||||||||| || | || ||||||||||| || | ||||| | |||| |||||||
Sbjct 35511 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCGCCACTGAAGAAG 35570
Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310
|| ||||| || || || || || ||| | || | || || | || ||| || |
Sbjct 35571 ATACCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGG 35630
Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370
||||| | |||||||| |||||||| |||||| || || ||||| ||||| |
Sbjct 35631 ATCCATCGGATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTG 35690
Query 48371 AAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATC 48430
||||| | | | || | | ||| | ||||| || || | ||| ||
Sbjct 35691 AAGAGATATGTTCGCTGGGCGGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTC 35750
Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490
|| ||||| | ||||| || ||||||||| ||||||||| | ||||| | |
Sbjct 35751 TCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGATC 35810
Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550
|| || || ||||| ||| | || ||||| ||||| || ||||| || |||||
Sbjct 35811 TGGACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACGATACCATCAGAGGCAGCG 35870
Query 48551 AAGAAGGCAAGGA 48563
||||| |||||||
Sbjct 35871 AAGAAAGCAAGGA 35883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931504842371840
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