Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20sp._20NRRL_2031653_20[genbank_20GCA_5F001654555.1_202016-
06-02] 2,401 sequences; 41,308,709 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1076 219 8e-52
seq179 183 6e-41
>seq1076
Length=4255
Score = 219 bits (242), Expect = 8e-52
Identities = 722/1103 (65%), Gaps = 47/1103 (4%)
Strand=Plus/Minus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475
|| ||||||||||| |||||||||||||||||| ||||||||| ||| | ||||||||
Sbjct 2374 GTGAGGGCAGCGTGATAGATGGTCTCAAAGATCTGCTTGTTGAG-CTCACGAGCCTCGGG 2316
Query 221476 AGAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533
|| ||||||||||||||| | | ||||| | || || || ||||| || || | |
Sbjct 2315 TGACTCGAAGGGCATACGCAG-AGCAAGGAAAG-CATCAGCAAGGCCCTGAACACCAAGA 2258
Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591
|| ||||| | ||| | | |||| | ||| | || |||| || || || ||| |
Sbjct 2257 CCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGC-CTCCTGG-ACAGGGTAGTGGTTCA 2200
Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651
| ||||| | ||||| ||||| || | | || | | |||| || ||||| |
Sbjct 2199 CATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTTATGCAACTTCTTGA 2140
Query 221652 GATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGC 221711
| | | ||| | | ||| || || | || | | || | |
Sbjct 2139 AGTCGTAG--CAAG-CTTCATCGTAGTTGATG---------AAGGAGGGCAGAGACAGAG 2092
Query 221712 TGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGA 221771
||| ||||| || || || |||||||| | |||| || || || || || |
Sbjct 2091 AGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAGTACTCGATAATTTCAGTGCAAA 2032
Query 221772 GGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCT 221831
||||| || |||||| || |||| || || || |||||| ||| || ||||
Sbjct 2031 GGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCT 1972
Query 221832 TGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTT 221891
|||||||||| || || || ||||| ||| ||| | ||||| || ||| || |
Sbjct 1971 TGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCT 1912
Query 221892 CTCTG-GCGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACCCGGTA 221944
|||| || | | ||| | |||| | | |||| |||||| |||
Sbjct 1911 -TCTGAGCCTTGATGGTCTTGCGACCCTTGCCCTCCTTCTCGTACTTTTCGTAC------ 1859
Query 221945 TAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACAC 222004
||||| | | |||| || ||||| ||| | ||||| || ||| | ||| |||
Sbjct 1858 -AGAGCCT--CGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCAC 1802
Query 222005 ATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGC 222064
||||| |||||| ||| | || || | | |||||| || || |||||||| ||
Sbjct 1801 ATCAGTGTCCAGTCACCGTTCTTTTCAACACGTTTCATGAAAAGATCAGGGATCCAAAGG 1742
Query 222065 GCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAA 222124
|| | || ||||| | || || ||||||| |||| ||| || | |||||||
Sbjct 1741 GCAAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGG 1682
Query 222125 AACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTG 222184
|| || || | |||| |||||| ||||| || |||| ||| | ||| ||||||||||||
Sbjct 1681 AAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTG 1622
Query 222185 TTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAG 222243
||||||||||| || | ||| | ||| | |||||||| ||||| | || || |
Sbjct 1621 TTGCCACCCTGGTCGA-CATACCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAT 1563
Query 222244 TCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG-G 222302
|| || ||| ||||||||| || ||||| | || || | | ||| | |
Sbjct 1562 ACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCCAGTAGCAC---GAATACGGTG 1506
Query 222303 CAGA--CATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTC 222360
|| | | || |||||||| || || ||||||||||| ||| |||||||||| ||
Sbjct 1505 CACATTTAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATC 1446
Query 222361 CATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGA 222420
||| ||||| ||| ||| ||||| | | | || || ||||| || | || |
Sbjct 1445 GTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGATAATTGGGG 1386
Query 222421 TTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACAT 222480
| | | | ||| || || |||||||| || || || ||| | ||||||||
Sbjct 1385 CTGAGGAGTGCCGGCATTGAAGAGCGTGGGGGAAGCATGCGTGAAGAACTTGCTAGACAT 1326
Query 222481 CAGATCGTACGTCTCTACGACTC 222503
||||| ||| ||||| | |||||
Sbjct 1325 CAGATTGTATGTCTCCAAGACTC 1303
>seq179
Length=39909
Score = 183 bits (202), Expect = 6e-41
Identities = 385/571 (67%), Gaps = 11/571 (2%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | ||||||||||||||| | || |||||| || || |||||||||||
Sbjct 36007 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTC 35948
Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592
||||||| | ||| |||| || || || | || |||||| || ||
Sbjct 35947 TCCAAGGATCTTCACGACTGGAACAACCGC-CTGACTGCTGATGAGCAGTTCTTCGTCTC 35889
Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652
|| | | || ||||| || |||||||||||||| || |||||||| || |||| |
Sbjct 35888 TCACATCCTTGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTCGTCGAGCG 35829
Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712
||||| | || || ||| | ||||| || |||||||| |||||||| ||
Sbjct 35828 ATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGAT 35769
Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGT 25769
|| || | ||||| ||| || || || || || || ||||| | ||
Sbjct 35768 GGAGAACATTCACTCCGAGACCTACTCC---CTCCTCATCGACACCTACATCAAGGAGCC 35712
Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829
|||| || || || || ||||| ||| ||| ||| ||||| | ||||||
Sbjct 35711 CGCCCAGCGAACATATCTCTTCAACGCCATTGAGACCATTCCCTGCATCCGAAAGAAGGC 35652
Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889
|||||||| |||||| | || | | | |||| | |||| || || ||
Sbjct 35651 TGACTGGGCCATCCGATGGATCCAGGATAAGGACTCCTCCTTTGCCCAGCGTCTCGTTGC 35592
Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949
|||||||||||| ||||| ||||| ||||| || | || || | ||||||||||||||
Sbjct 35591 CTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGCGCCTTCGCCTCTATCTTCTGGCTCAA 35532
Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009
| || || |||||| || ||| ||| ||||||||||||||| | ||||||||
Sbjct 35531 GAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGG 35472
Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040
||| |||| || ||||||||||| ||| ||
Sbjct 35471 TCTTCACACTGACTTTGCCTGCCTCCTCCAC 35441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928816923045440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |